Protein

View in Explore
Genbank accession
QJT71853.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MANLSSTSTIGGMPIWHKGIFPLTPVGDSIYFKSFKIYSENDKPQAADNDFVSKASGGTYLNLVGFDKGITIKDKNNATLSISSVVGAGPQTASLRIPGTFAIETSVGTPFVLFDPNTSATRLTVMGDTLAKFVYDESGRVFSPGNTPTKAHVGLDKVTNNKQVASDVTALQTMDGILAAPNFISQNPASQPTHVPQFSQIVVKGSIQDFGLY
Physico‐chemical
properties
protein length:213 AA
molecular weight: 22582,23910 Da
isoelectric point:6,82315
aromaticity:0,08920
hydropathy:-0,06995

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJT71853.1
1 213
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,4890
Central domain 147 202 57 0,0181
C-terminal 203 213 10 0,9872
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-202
C-terminal
203-213

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage Thanatos-1
[NCBI] 		2734808 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT71853.1 [NCBI]
Genbank nucleotide accession
MT457552 [NCBI]
CDS location
range 131030 -> 131671
strand -
CDS
ATGGCAAATTTAAGCTCGACAAGTACAATTGGAGGTATGCCCATATGGCATAAAGGGATTTTCCCATTGACGCCAGTCGGCGACTCCATATATTTTAAAAGTTTTAAGATTTATTCTGAAAACGATAAACCCCAAGCAGCAGATAACGACTTTGTTTCTAAAGCCTCAGGTGGCACTTATTTGAATCTTGTTGGATTTGATAAAGGTATAACAATAAAAGATAAGAACAATGCCACTCTCAGTATCTCTAGTGTCGTAGGAGCTGGCCCTCAAACGGCTTCATTGCGTATCCCTGGTACATTTGCAATAGAAACATCAGTAGGCACACCATTTGTATTATTTGACCCTAATACGTCAGCCACACGATTGACTGTAATGGGAGATACATTAGCTAAATTCGTATATGATGAATCAGGACGTGTATTCAGCCCCGGCAATACACCTACAAAGGCACATGTTGGGTTAGATAAAGTAACAAATAATAAGCAAGTTGCATCAGATGTTACTGCGTTACAAACTATGGACGGTATATTAGCTGCACCTAATTTTATTAGTCAGAACCCTGCTTCTCAGCCTACTCATGTTCCTCAGTTTTCTCAAATTGTAGTGAAAGGGTCTATTCAAGATTTCGGATTATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b932f3093f9ef009c8c4f44dae0513fff3905d611ebbd5b542a991560358d48a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5852
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Thanatos infecting and lysing Shewanella oneidensis and promoting nascent biofilm formation Kreienbaum,M., Doerrich,A.K., Brandt,D., Leonhard,T., Hager,F., Brenzinger,S., Hahn,J., Ruwe,M., Briegel,A., Kalinowski,J. and Thormann,K.M. 2020-09-18 — GenBank