Protein

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Genbank accession
YP_010078257.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADVQFANNAVSRLVGPLTPSGTSLTVTPGDGALFPTLGAGDWFMATLIRADGVREIVKVTSRTVDAMSITRAQESTSALSFSPNDRIEARLTKSVLDAFRDGISSAQAAASAAQSAADGKVSKAGDTMSGNLTLPGIAVENSAPIVTFRETDQGAPAGRWRLVSDGGNWFLRRSTAGEFSSENNTMWFGADDNANFQNDILIGRGGLGSVYDALASKATTVALNNGLAGKLAGDGSSVVGFVNGNYFAPYIRKTSDNTVRQLVANTSGNAIALSWSGTFLSRTIDNSNTATMWDTANAPNIDKSFYSGDGTRIGRSWGVGSGFITLTVDGGSYGITINPSDERLKREIAPSATDALDKLGKIELFSFRYREGNPFLNAEQQHEIGFIAQQLERIDPTFAAGGGETMLSPNLLPIVATLVKAVQELRAQVDALKAQVVA
Physico‐chemical
properties
protein length:439 AA
molecular weight: 46239,03670 Da
isoelectric point:5,11098
aromaticity:0,07517
hydropathy:-0,12301

Domains

Domains [InterPro]
DC_0891
STR
1–437
DC_0891
IPR030392
CHP
341–398
IPR030392 Coil
IPR030392
CHP
341–437
IPR030392
YP_010078257.1
1 439
Architecture
STR
STR 1-437 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage Cimandef
[NCBI] 		2759720 Uroviricota > Caudoviricetes > Cimandefvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010078257.1 [NCBI]
Genbank nucleotide accession
NC_054956.1 [NCBI]
CDS location
range 33987 -> 35306
strand +
CDS
ATGGCTGACGTCCAATTCGCAAACAACGCTGTCAGCCGTCTTGTCGGCCCGCTGACGCCTTCCGGCACGTCATTGACGGTCACGCCGGGGGATGGTGCGCTTTTCCCGACGCTCGGCGCTGGCGACTGGTTCATGGCGACGCTGATCCGGGCGGACGGCGTGCGCGAGATCGTCAAGGTGACGTCGCGCACGGTCGACGCCATGTCCATCACGCGCGCGCAGGAAAGCACGTCTGCGCTCTCGTTCAGCCCGAACGATCGCATCGAGGCACGCCTGACTAAGAGCGTGCTGGATGCCTTCCGCGATGGCATCTCCTCCGCGCAAGCTGCGGCCAGCGCCGCGCAGAGCGCCGCCGATGGGAAGGTCTCCAAGGCGGGGGACACCATGTCCGGCAACCTCACCTTGCCGGGCATCGCAGTGGAGAATTCTGCGCCGATTGTCACGTTCCGCGAGACTGATCAGGGCGCGCCTGCCGGCCGCTGGCGTCTCGTTTCGGATGGCGGAAACTGGTTCTTGCGACGGAGCACGGCGGGCGAGTTCAGCTCCGAGAACAACACCATGTGGTTTGGTGCGGATGACAACGCGAACTTCCAGAACGACATCCTGATCGGCCGTGGTGGCCTGGGCTCGGTGTATGACGCCTTGGCGAGCAAGGCGACCACGGTGGCCCTGAACAACGGGCTGGCCGGAAAACTTGCCGGGGATGGCTCCTCGGTGGTCGGATTCGTCAACGGCAACTACTTCGCCCCGTATATCCGGAAAACGTCGGACAACACCGTGCGCCAGCTGGTGGCGAACACGAGTGGCAATGCAATCGCCCTGTCGTGGTCTGGCACGTTCCTGAGCCGCACGATCGACAACAGCAACACGGCCACCATGTGGGATACCGCCAACGCGCCCAACATCGACAAGTCTTTCTACTCTGGGGACGGCACGCGTATCGGGCGGAGCTGGGGTGTCGGTAGCGGCTTCATTACTCTTACGGTGGACGGCGGCAGCTACGGCATCACGATCAATCCGTCCGACGAGCGGCTGAAGCGCGAGATCGCGCCCAGCGCCACGGACGCCCTGGACAAGCTTGGCAAGATCGAGCTGTTCAGCTTCCGCTACCGCGAGGGCAACCCCTTCCTGAACGCCGAGCAGCAGCACGAGATCGGATTCATCGCCCAGCAGCTGGAGCGCATCGACCCGACGTTCGCGGCCGGCGGCGGCGAAACGATGCTGTCCCCGAACCTGCTGCCCATCGTGGCGACGCTGGTGAAGGCGGTGCAGGAGCTGCGCGCGCAGGTGGACGCCCTCAAGGCCCAGGTGGTCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7334d469f1eae1c3e20d26358997baf8d2324ad58bf4f61a29f7ce0e96ee1006
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ralstonia phages Trotereau,A., Boyer,C. and Torres-Barcelo,C. 2021-03-08 — GenBank