Protein

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Genbank accession
AHY25235.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MADIKQIQFKRSNTAGARPTSEQIAEGELAINLTDRTLFTKNTLGQVIDLGFAKGGTVVGDINQTGNINSTGNIVAAEILATTRLDSNGPITSNNGRIYSNAPANVDAKVILQGLEIPSSRLRERGSIWAAPQTTTFGSVVISSYNGTNATTASNFIFNGDGDLNVPKNVLATQFKASVQIESPKTVTRQIITSGRATINEFGGNPDYGWNDLVSWPHSETNSINYVYKGRASSSGTIWHQVLDERAGVAEWALYTGVSTSAKNFSVSSIGDGKFRRNLIIGSSSGANYSSLGDNSISIGDVNTGFRRPSLGNLHVLANNSIVAGFSEPDGLNYSYRRLVVQTNNLSNQSVLPENNTAQLRIATFNDNNNFGDGWTHIGYNAGGEYNHYFRGKGEAAFAMGKGVNIATGGLKVTGDSSFVGNVTITGQITPQNYANFDIRYPSYSALSSGINQEIVSRSANAFRSVGARYGFIIRSSGDATHFLSTAIDDPYGTFSSNRPLRIDHITGIVTMEQGLSVLTNVNIGAATYRTDGNILGSNWTSGNLATHISTEDGKRVLKTGDTMSGRLFINQNEGAQLVVNNPEANGPVFIIGRKNQADSFYVGNGNSNSGDVMLHNYVFNNTLTLRQNDTLISKPLLVTGGITSTGGITLGDWTNIDNRINNSSLGVGQTWVNQSRTFNTEYTNDTNKPIMVNVSFSWETNGTIIQFLVDNVVVDTNRIRGFSMSGNFQVIVPKGSKYMITRVSQDISAVIISNWAELR
Physico‐chemical
properties
protein length:760 AA
molecular weight: 81808,66450 Da
isoelectric point:7,81255
aromaticity:0,08421
hydropathy:-0,27711

Domains

Domains [InterPro]
DC_0538
STR
1–505
DC_0538 G3DSA:6.20.80.10
IPR048390
ATT
450–503
IPR048390 IPR048388
AHY25235.1
1 760
Architecture
STR
ATT
ATT
STR 1-449 | ATT 450-503 | ATT 575-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHY25235.1
1 760
Domain Start End Length (AA) Confidence
N-terminal 1 363 363 0,1786
Central domain 364 562 200 0,3258
C-terminal 563 760 197 0,8533
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-363
Central
364-562
C-terminal
563-760

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium bacteriophage PM2
[NCBI] 		1429794 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosugukvirus
Host Pectobacterium
[NCBI] 		122277 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
0c917cbc6dbcf2f192466c43c7618decc26675411f32c8aac94080c12090e5e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50