Protein

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Genbank accession
AGY47158.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MASRITRSTPMMDRPTWLGLFSTLVKTTSRQRPIIFLDVGDSIKEGYGTVNPVNGWAYENAKEIQRVWGDPSWDDLGFQYIPTYQQFDYPTPNTKWGVQSTGSKTEGSLYGIGRKSAIKYAASSSTWTDMCTSMAVLVYQPAGKTTQIEVYVDDKLIKTHTTTTGSKLYSTGVLPLANRKVTFRYLSSSGAYESGIGVYRGSETKGYQTWVAAKSGTYTANFISSGGANVSNPTNAHLIAAGGIGTPDVISYNWITNDIHSSNGKRTPAQLEADYLQMIDDNEAQFGNKVLHFINTPQELRTENKMDTWENYMKALSRVAAQRDRVLFEPLSDHFEIKAASNDPWYFDGLHPNEAGYRRYGQKTVQILAGSVEGGGSDTTAPTITLVSPAAGATVTGVVPFRVTITDASGVGSAGVSSGNTSLGKLTKISGDTYGLDVDYTKLQGITSWFAFAGDTITPPNTAKTASRAITVASAGGTTPLSLDFSNVGDSLAENYYVNKAKLVAAYPSSTFAVQAKGGYLGTEVAAFQGGHPATAIFPNNTIPAAATATTITLDINLLASPGETGDRSQVVRISGVTGTLRSVKASTGNNTGSYTHTFTRTTAGTAVTIPSTGAQVLLGDEHTGRLMLIQTERNSFHLGTDAQAVTRIQEMMAFNRRPTKDHIVFDIPAADKTIELPGTALRNQLDSRNAALKAAFPNNFVEASKYLQSETIIRKAGLIPTDEDRADIANGFVPASFRSDSVHYNQSAYDMISDLVIENLKARGFAPETDISDKDTTAPILELVSPVAGATVSGTIPFRVRATDATGVSTVQVYSGPGIVGVMSPLGDGLYGLDVDYATMQGKSGWRAIAADTVTPQNTTSSATRALTIAPLPSNQTLPPTITNIKPVGGMKLSGNVTFEATVASAGNKIASVAFFSRGVLIGAGTETTPGVWTLQKVAGSANFPVTMVDFYVVAQDDAATPNTTQSEPVAVTVEEKVVTPPVPVLTAPASNAVLTGTVKFQAVVTDAVGVLTVGFWTGNTPLFPATRVGGTTIWEATAAAGDLPEDLTSVRVRAVNNGLVEAFSNPTPVTVRPGGSIQLGDPNDRLISEAMLTTALAKVYALVNPLSGTSTMRPPAATVAAGTLFYDTTTKVPQWSDGVVWRQADGSVV
Physico‐chemical
properties
protein length:1151 AA
molecular weight: 121833,21810 Da
isoelectric point:5,86888
aromaticity:0,07993
hydropathy:-0,12650

Domains

Domains [InterPro]
SSF52266
STR
38–370
SSF52266 PF17957 DC_1883
cd00229
ENZ
181–363
cd00229 IPR013783 IPR013783 IPR013783
IPR036514
STR
182–370
IPR036514 PF17957
IPR013830
ENZ
201–359
IPR013830 DC_1040
AGY47158.1
1 1151
Architecture
STR
RBD
STR 38-1075 | RBD 1076-1151
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGY47158.1
1 1151
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,6777
Central domain 32 230 200 0,5709
C-terminal 231 1151 920 0,2560
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-230
C-terminal
231-1151

Taxonomy

  Name Taxonomy ID Lineage
Phage Clavibacter phage CN1A
[NCBI] 		1406793 Uroviricota > Caudoviricetes > Cinunavirus >
Host Clavibacter michiganensis
[NCBI] 		28447 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Micrococcales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
c3179a0eff612ccb997134eb4f16bffefeccf2b1a0904e40d4daa964edf3ca34
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50