Protein

View in Explore
Genbank accession
WCZ56768.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIQRLGSSLVKMPNGLTLTQWLQPANIIKVDDAPYNGDLIAAYNAVPVTGNYALVLTNHTYNAVGLFDAGRNTKPNITIIGAGMPQLAGDRASFVTGSGTIIKGAIKNSAKGFQIANLGIDCGNTVSRIDYQPARFEDPLQVYGCGANANIFIDNVKCLSAVSVEERPGTHSILLEQTEGVTLGYVECIGGFHGLTIKCRNLRGGIAHCYGQYGDGFIIKSDSGGAASHIYMERIQVGHPDQAMWPDVHLGGIYDAHDGVTIDSVSIGELHVVRGSWGLIPADNATGNITNFHIGHYECHLTYGNYYSLVINNKVVGWAMGTHNITNCSGGIKVDPASVYVNIGTGRSTNNTESGYALGGNTLIHGELIADANGKYGVEYTGGLGLDVSKIHGFQNPLGTYSGYSSAIQSLLWPDAGFEAMVTGRTVTLRGSLTKGSTAWCGQVLDAVKPKRDIRIYAWAVGLGGSMVPVEAWVRAANGAIDVVGKDSVGEGQIVSFTGSYIFK
Physico‐chemical
properties
protein length:504 AA
molecular weight: 53369,68440 Da
isoelectric point:6,19178
aromaticity:0,08532
hydropathy:0,00794

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ56768.1
1 504
Domain Start End Length (AA) Confidence
N-terminal 1 35 35 0,9401
Central domain 36 394 360 0,9938
C-terminal 395 504 109 0,9902
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-35
Central
36-394
C-terminal
395-504

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K30
[NCBI] 		3027619 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ56768.1 [NCBI]
Genbank nucleotide accession
OQ291025.1 [NCBI]
CDS location
range 42319 -> 43833
strand +
CDS
ATGATACAAAGATTAGGCTCTTCATTAGTGAAGATGCCAAATGGTCTTACGTTGACACAATGGTTGCAACCTGCAAACATCATCAAGGTAGATGATGCGCCATACAATGGAGACCTTATTGCTGCATATAATGCTGTCCCAGTTACAGGCAACTATGCCTTGGTTCTTACCAACCACACTTACAATGCAGTTGGTTTGTTTGATGCAGGTCGTAACACGAAGCCTAACATCACTATCATTGGTGCTGGTATGCCTCAACTTGCAGGAGACAGGGCATCCTTTGTTACTGGTTCTGGTACTATTATCAAAGGTGCAATAAAGAACTCCGCCAAAGGATTCCAGATTGCCAACCTGGGTATTGATTGTGGCAACACAGTTAGTCGCATAGACTACCAACCTGCTCGCTTCGAAGACCCGTTACAGGTGTATGGATGTGGGGCTAATGCTAACATCTTCATCGATAATGTGAAGTGCCTTAGTGCAGTTTCTGTAGAGGAACGACCGGGAACACACAGCATCCTGCTTGAGCAGACTGAAGGTGTGACATTAGGCTATGTAGAATGCATTGGTGGATTCCACGGACTCACCATCAAGTGCCGTAACCTCCGAGGTGGTATAGCACATTGCTACGGTCAGTATGGTGATGGTTTCATTATCAAATCTGATTCTGGTGGTGCAGCAAGCCATATCTACATGGAACGGATTCAGGTAGGACACCCAGACCAAGCTATGTGGCCGGATGTGCACTTAGGTGGTATCTACGATGCACACGATGGTGTCACCATTGACAGTGTGAGTATTGGTGAGTTGCATGTTGTGCGAGGTAGCTGGGGTCTTATTCCTGCTGACAATGCTACTGGTAATATCACCAACTTCCACATTGGACATTACGAGTGCCACCTTACTTATGGTAACTATTACTCTCTTGTTATTAACAACAAGGTTGTAGGTTGGGCTATGGGTACTCACAACATCACTAACTGCTCAGGTGGTATCAAGGTAGACCCTGCCTCGGTATATGTAAACATCGGTACTGGTCGCTCTACAAATAACACTGAAAGTGGCTATGCTCTTGGTGGTAACACCTTGATTCATGGTGAACTGATTGCAGATGCGAATGGTAAGTACGGTGTTGAGTATACAGGTGGCCTAGGTCTTGACGTGAGTAAGATTCATGGATTCCAGAATCCACTAGGCACTTACTCAGGATACTCTTCTGCCATCCAATCACTGCTATGGCCGGATGCTGGCTTCGAAGCCATGGTTACAGGTCGCACTGTAACTCTACGTGGCTCACTTACGAAGGGTAGCACTGCATGGTGCGGTCAAGTGCTTGATGCTGTTAAACCTAAGCGCGACATTCGTATCTACGCATGGGCTGTTGGCTTAGGTGGCTCTATGGTTCCTGTGGAAGCATGGGTACGTGCTGCTAATGGTGCCATTGATGTTGTAGGCAAAGACTCGGTAGGTGAAGGGCAGATTGTCAGCTTCACTGGCAGCTACATCTTCAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5efe0f4cc25b5492cbe21138e5ab12d82d41b4e17836d25cd3518fb95a24980d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K30 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank