Protein

View in Explore
Genbank accession
AXF41694.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEIIYFSVGALLTGYKVIYDKAIQRAYSLPADIGSGVTAVSLSPAGVLAHSAGNVDLGALAVTREEYVTLPGSFETGVTVNTKNELVVFTDGKYRWDGALPKEVPADSSPDSTGEIKIGGWVSVGDASLRSWVNKNITINFKTVSELVTGTLPSGENISLVEGMLVETAANEYGIKTISKWRVSATKDSSTYAITLANGLFANLILHRNMGYEEFGFGGTDPVANSAAIDEANRVARANAVIKKLSFPSGTFSTNQVTLDVDRRGFTFSGAGNDATILMSADSDISLHHVGIDPRDRNRDRLHWHQTIEGFTVNGGVVEKGASAAGRAIYTAPYTTIKNKSINHRISNYDLLHLVMHWYGHSQGKSNGATSTKYGVRVRNNSIKLMGYIGGSTGQCTVSIEGMSTTLSSAANIGDTTVTVADAAGFDTWFEIAFTNSTGGVETRRITAISGNVLTLDRAMTSVFQSGTKVEVPIIGTSVISSTIETGEVRIGDSQATYIAGNYSEEAKMYITKYVRALTVTGTSTAEASPAITIEVDRRSSIKIEGNDTTFSIAVNITDRSGAVGERIDLYSAPALDIRMNTRVQNPIILNGVYGLSSLKIEKTFDTVVQDNRFTRMTFSGFNHVAPAGGSTTEVMKFFQDTAQYGFDGYTFDLDIVCRRDGNSSATTPGILKRYGTSSAALVAQNNAPVSLFSDFNASTGYDVFIGASGNRGTVQIRPNPTSSVKASISGTVTSVI
Physico‐chemical
properties
protein length:767 AA
molecular weight: 81737,56300 Da
isoelectric point:6,49075
aromaticity:0,08083
hydropathy:-0,10834

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_0965
IPR040775
RBD
91–156
IPR040775
AXF41694.1
1 767
Architecture
ATT
STR
ATT 1-165 | STR 166-767
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF41694.1
1 767
Domain Start End Length (AA) Confidence
N-terminal 1 254 254 0,9925
Central domain 255 461 208 0,9830
C-terminal 462 767 305 0,4889
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-254
Central
255-461
C-terminal
462-767

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalM-LPST94
[NCBI] 		2282399 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41694.1 [NCBI]
Genbank nucleotide accession
MH523359.1 [NCBI]
CDS location
range 102076 -> 104379
strand +
CDS
ATGAACGAGATGTTCAGTCAAGGCGGTAAAGGTTCAACTGGAATCTTAACCAACAAGCAAGCAGTAGCCAGACACTTTGGAGTTAAGCAATCTGAGATTATTTATTTCTCAGTCGGTGCTCTGCTTACTGGTTACAAAGTCATTTATGACAAAGCAATACAGCGTGCTTACTCATTACCTGCTGACATTGGTTCAGGGGTTACTGCTGTAAGTCTTAGTCCTGCTGGTGTGTTAGCCCACTCTGCTGGTAATGTAGATTTAGGTGCATTAGCTGTTACTCGTGAAGAGTATGTGACCTTACCTGGTTCATTCGAGACAGGGGTAACGGTTAATACTAAGAATGAGTTAGTTGTCTTTACAGATGGTAAATACCGTTGGGATGGGGCATTGCCTAAAGAAGTCCCAGCTGATTCATCTCCAGATAGTACTGGTGAAATTAAAATAGGAGGGTGGGTTAGTGTTGGTGATGCTTCTTTGAGATCTTGGGTTAATAAGAATATTACAATTAATTTTAAAACGGTTAGCGAACTTGTGACTGGAACCCTACCATCTGGCGAGAATATTTCATTAGTAGAGGGAATGCTAGTTGAAACAGCAGCTAACGAATATGGTATTAAAACAATATCAAAATGGCGAGTCAGTGCTACGAAAGATAGCAGCACATATGCTATAACCCTTGCAAATGGTTTATTCGCTAACCTAATACTACACCGTAATATGGGTTATGAAGAGTTTGGTTTTGGTGGAACTGACCCTGTTGCTAACTCTGCTGCTATAGATGAGGCTAACCGTGTAGCGCGAGCCAATGCAGTTATTAAAAAGCTCAGTTTTCCATCTGGTACTTTTAGTACAAACCAAGTGACTCTTGATGTTGACCGCCGTGGGTTCACCTTCTCTGGTGCTGGTAATGACGCAACTATTCTCATGTCAGCAGATTCAGACATTTCACTGCACCACGTTGGTATTGACCCACGTGATAGAAATCGAGATCGACTACACTGGCATCAAACCATTGAAGGTTTCACGGTTAATGGTGGAGTAGTGGAAAAAGGAGCATCAGCAGCCGGGAGAGCTATTTACACAGCGCCCTATACAACCATTAAGAATAAATCAATTAACCACCGTATCAGTAATTATGACTTGTTGCATCTGGTTATGCATTGGTACGGTCACTCCCAAGGAAAATCAAACGGCGCAACTTCGACAAAGTATGGTGTTCGCGTCCGAAATAACTCGATAAAACTGATGGGCTATATTGGTGGTAGTACGGGACAGTGTACGGTTTCTATTGAAGGAATGAGTACGACACTTAGCTCAGCAGCAAATATTGGGGATACTACTGTTACTGTTGCTGACGCAGCTGGATTCGATACTTGGTTTGAGATTGCTTTCACTAATTCTACTGGAGGTGTAGAAACACGACGTATCACAGCAATCTCTGGGAATGTGTTGACACTTGATCGTGCAATGACTTCTGTGTTTCAGTCAGGGACTAAGGTTGAAGTTCCCATTATTGGGACGTCAGTAATTTCAAGTACAATTGAAACAGGTGAGGTAAGAATTGGTGACAGCCAGGCAACTTATATCGCAGGAAACTACAGTGAAGAGGCAAAGATGTATATAACAAAATACGTTAGAGCTTTGACTGTCACTGGGACATCAACAGCTGAGGCTTCACCGGCTATTACAATTGAAGTAGACAGGCGTTCATCTATAAAAATTGAAGGAAATGACACTACGTTTTCTATTGCTGTTAACATTACCGATCGTTCTGGGGCTGTGGGCGAACGTATAGATTTATACAGTGCCCCTGCGCTAGATATTCGCATGAACACCCGAGTACAAAACCCCATTATCTTAAACGGTGTATATGGGCTTAGTAGTCTTAAGATTGAAAAGACTTTTGATACTGTTGTACAAGATAATCGATTTACTCGTATGACCTTCTCCGGTTTCAACCATGTTGCTCCGGCTGGGGGTTCAACTACTGAAGTAATGAAGTTCTTCCAGGATACTGCACAGTACGGATTTGACGGCTATACTTTTGACTTGGATATTGTATGCAGAAGGGATGGTAATTCTTCTGCTACTACACCTGGTATATTGAAGCGATATGGGACATCATCAGCTGCACTAGTTGCGCAAAATAATGCTCCTGTAAGTCTGTTCTCTGACTTTAATGCTTCAACCGGATATGATGTGTTTATCGGAGCATCTGGTAACAGGGGTACTGTTCAAATTAGACCAAATCCAACTTCAAGTGTAAAAGCGTCTATCTCTGGAACTGTGACGTCGGTAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
841a2130e3a49783a7deb9372c69b56c1ae88e4ed37ca6f4bb2e12fb672729f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6624
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50