Protein

View in Explore
Genbank accession
AUS02386.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MGMNITNSPQGESNLVVQEGTHIVVSEPDVLVCGNDDPQLLSINYEKPTDCIKPNGTYLQGPPGPPGSDGQQGPRGFQGIQGPIGPGGTGPEGPPGVDRYTWIKYADSITPPPEDMFNESGYRYIGIAHNQLVIQGGGDPNESDYTVYQWSQILGEDGDSIVGPAGPQGIPGEDGSGFNWVGQFPQDPTEVELGRPPEEGDTYYNTSDGTSYHYFYGGWEILVGTGEGDVGPAGPVGGSYIWKGDSDTNPSSPSYNWLYRNTTDNLYYTFDGTAWVLATSDGRSNITGTPLIEGNYFYTTYYSGATPPPPTLEGVANGWNPNPASFAPGTITHVSQKIGFTPTVGDWGPVTNIELLPFRGPFGFRGSASTSVGIVGWDQVWSDKIAEQFLSGAPQEFDTVTLYLDGDTGVQETRRFVNTTGVAWEWEPYEPVILERVVGDVDIFSLPLVTGAHPSTVRKSYTISKSSEKDYVVSVSSMEVEIVEGTGTATVVVDVALDGVVDDSSTISSNNRSLTKGLFTAIPQGSGDVELTLNTSITLTGDASASINAQKILFTYNGVNNTFN
Physico‐chemical
properties
protein length:564 AA
molecular weight: 60216,14900 Da
isoelectric point:4,10050
aromaticity:0,10461
hydropathy:-0,37872

Domains

Domains [InterPro]
DC_1431
STR
2–563
DC_1431
AUS02386.1
1 564
Architecture
STR
STR 2-563 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.130.O._10N.222.46.C2
[NCBI] 		1881448 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02386.1 [NCBI]
Genbank nucleotide accession
MG592668.1 [NCBI]
CDS location
range 8455 -> 10149
strand +
CDS
ATGGGAATGAACATAACTAACTCCCCTCAAGGGGAGTCTAATTTAGTAGTACAGGAGGGTACTCATATTGTTGTTAGTGAACCCGATGTACTTGTATGTGGTAATGATGATCCTCAATTACTGAGTATTAACTACGAGAAGCCCACTGACTGTATTAAACCTAATGGCACTTACTTACAAGGTCCTCCGGGTCCTCCGGGGAGTGATGGGCAGCAAGGCCCAAGAGGTTTCCAAGGTATCCAAGGACCAATAGGTCCGGGAGGTACAGGCCCAGAGGGTCCCCCGGGAGTAGATAGATATACTTGGATTAAGTATGCAGACTCTATTACTCCACCTCCTGAGGATATGTTTAATGAATCTGGTTACAGATATATTGGTATTGCACATAACCAGTTGGTTATACAAGGTGGAGGTGACCCAAATGAATCAGATTACACTGTGTATCAGTGGAGTCAGATACTTGGTGAAGATGGCGATTCAATAGTAGGTCCAGCTGGTCCTCAAGGTATTCCCGGGGAAGACGGTTCAGGTTTTAACTGGGTAGGTCAGTTCCCTCAAGATCCTACAGAGGTAGAGTTGGGTAGACCTCCTGAAGAAGGGGATACTTATTACAATACTTCGGATGGCACTAGCTATCACTACTTCTACGGAGGTTGGGAAATACTTGTAGGTACAGGAGAGGGTGATGTAGGCCCTGCAGGCCCTGTAGGAGGCAGTTATATATGGAAGGGGGACTCTGATACCAATCCTAGCTCTCCTAGCTATAACTGGCTGTATAGGAACACTACGGACAATCTTTATTATACTTTTGATGGTACTGCTTGGGTGTTAGCTACATCAGATGGTAGATCTAATATTACCGGTACACCTCTTATTGAAGGTAACTACTTTTATACGACTTATTACTCTGGAGCCACTCCTCCTCCACCTACCCTAGAGGGTGTTGCAAATGGTTGGAATCCTAACCCGGCTTCCTTTGCTCCCGGGACTATCACCCACGTATCGCAGAAGATTGGGTTTACTCCTACTGTTGGTGATTGGGGCCCTGTTACTAATATTGAGCTATTACCATTTAGAGGTCCATTTGGATTCCGTGGTAGTGCATCAACATCTGTTGGCATTGTAGGTTGGGACCAAGTATGGAGTGATAAGATTGCAGAACAGTTCCTATCAGGTGCACCGCAAGAGTTTGATACTGTTACCCTGTATTTAGATGGTGATACTGGGGTACAAGAGACTAGACGTTTTGTTAACACAACAGGTGTTGCATGGGAATGGGAACCATATGAACCAGTAATACTAGAGAGGGTTGTAGGGGATGTTGATATATTCTCTTTACCTTTAGTAACCGGTGCACACCCTAGTACGGTACGTAAGTCTTATACTATTTCTAAGAGTTCAGAAAAGGATTATGTTGTTTCTGTTTCATCTATGGAAGTGGAGATTGTTGAAGGTACTGGTACAGCTACTGTAGTAGTAGATGTTGCTTTAGATGGCGTAGTAGATGACAGTTCTACAATATCTAGTAACAATAGATCACTAACAAAAGGGTTATTTACTGCTATACCTCAAGGATCAGGGGATGTAGAATTGACACTTAATACTAGTATTACACTTACAGGAGATGCTAGTGCATCAATTAATGCACAGAAGATTCTATTTACCTATAACGGGGTGAATAACACTTTCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
991c93bb331964fd25ccfd4237b97f371931d3ceb53435860e3267a9828bdbff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank