Protein

View in Explore
Genbank accession
ADP00137.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAHTKVTKTYSQNTGAANTFSYSGSFDVFKGTEVQVELDNIPLTFTASTINDSALSPREYSVDTSAKTIHIGGADLSSGTIVIRPVTDMGAPTPRATYAPGSSITSEDLNNNQLQLMRKAMEYDEQKLSSLGGTMTGHLTMGEDQTIIFEGATDDGYETTLTVADPTADHTITLPNITGTVVTTGDTATVSALMLAENSVDSSELVDGSIDTSHISSGAVTTAKLAADVVTGAKIADDAIDSEHYTDGSIDTAHIADAQVTTAKLADSSVTTAKIVDGTIVNADISTGAAIAHSKLSTMSAGNVLIGNSSNVPNSTTISGDVTITSSGVVTIGNEAVGTAKIAADAITGAKIANDAIDSEHYVNGSIDSAHIGDDQIISAKIADDAVDSEHLAAGSIDTEHIAGSQVTAAKLASNSVTTDKITDANVTTAKIADDAITIAKVGCEQTTISDSDSHIPTSGAVIDYVSAQIAPIGGLEVIADEDNFPTTQPAAGVVISIADAGGVVFNGSGVSTTARTAGNGSDNVTINNAPSSLYSETLAAGVGMQVSSTGSSHTYNYHKILAKEADVKQLSDDINDFNSRYRINAGEPGSNNDDGDLVWDTNANKMKVYDATASAWTEVTSTGDFKFLVPVDAGTTTAATWDGNDTSFDLKETTNSGSAASVSNINQLIVSLNGVIQKPNTGSYDASEEGFYLTDSDTIRFCTAPPSGSTAFILQIGSAVSIPTPGDGTVTTAKIASDAVTGAKIADDAVGAEHIELLDAPLHIADATNLLIGTGSDLKLWHYSDHSYIRNETGNLTIEANSAGDDAIKIIPDGAVELYHNNQKKIETISNGARIYSEDGAEAVLEYYADRGDQDADKFRTLASVNADWFLQNYYDGSWETNIKALGSGSVELYYDNVKTFETNDSGIKVFGPEGGSSFIYMHADEGDDNADKYHLQVDQDGTGFYIKNEVSGSTETNLRALGNGAVELYYDSSVKFNTSSDGATCHGSLSFVDSNKLKLGTGNDLEIYHNGSHSYLAQSGTGNIVLDVSSGQGTFIQTDSSSYSNLSVNNSHSDADSVDFFQCRDSSNNLKLQILSGGAVQNANNIYQQISDVKLKENIVDANSQWEDIKAIKIRNWNFKASTGLATHKQIGVVAQEIETISPGLIDENIDRDPETQVDLGTKTKSVKYSILYMKAIKALQEAMAKIETLETKVAALEAK
Physico‐chemical
properties
protein length:1202 AA
molecular weight: 126094,36720 Da
isoelectric point:4,37282
aromaticity:0,05907
hydropathy:-0,24027

Domains

Domains [InterPro]
DC_0591
STR
1–335
DC_0591 DC_1614 DC_0421
IPR030392
CHP
1093–1196
IPR030392
IPR030392
CHP
1093–1146
IPR030392 Coil
ADP00137.1
1 1202
Architecture
STR
STR
STR
STR 1-335 | STR 374-725 | STR 745-1202
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADP00137.1
1 1202
Domain Start End Length (AA) Confidence
N-terminal 1 751 751 0,7652
Central domain 752 950 200 0,2650
C-terminal 951 1202 251 0,9378
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-751
Central
752-950
C-terminal
951-1202

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage NATL1A-7
[NCBI] 		445693 Uroviricota > Caudoviricetes > Autographivirales > Cheungvirus > Cheungvirus NATL1A7
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADP00137.1 [NCBI]
Genbank nucleotide accession
GU071102.1 [NCBI]
CDS location
range 34391 -> 37999
strand -
CDS
ATGGCACATACAAAAGTAACAAAAACCTACTCCCAAAATACAGGAGCAGCAAATACATTTAGCTACTCTGGGAGTTTTGATGTATTTAAAGGTACAGAAGTACAAGTAGAACTAGATAACATACCGTTAACTTTTACAGCTTCTACTATAAATGATTCCGCCCTTTCCCCTAGAGAATATAGTGTAGATACTTCAGCTAAGACTATTCATATCGGTGGAGCTGATTTGTCTAGTGGTACGATAGTAATCAGACCTGTAACAGATATGGGTGCTCCTACACCAAGGGCTACCTATGCACCAGGTTCATCTATAACGTCAGAAGATCTTAACAATAACCAACTGCAGTTAATGCGGAAGGCTATGGAGTATGACGAGCAGAAGCTTTCTTCTCTTGGTGGTACGATGACAGGTCACCTGACAATGGGTGAAGACCAAACAATTATATTTGAAGGTGCAACAGATGATGGATATGAGACAACGCTTACTGTTGCTGATCCTACTGCTGATCATACTATTACCTTACCTAATATAACTGGTACTGTCGTAACAACTGGAGATACAGCAACAGTATCAGCATTGATGTTGGCAGAGAACTCTGTTGATTCTTCTGAGTTAGTAGATGGAAGTATAGATACAAGTCATATATCAAGTGGTGCAGTAACAACTGCTAAATTAGCTGCAGACGTTGTAACAGGAGCTAAAATAGCAGATGATGCGATAGATTCTGAACATTATACAGACGGTAGTATTGATACAGCACATATTGCAGATGCTCAAGTTACAACAGCTAAATTAGCAGATAGTTCTGTAACTACAGCTAAAATAGTTGATGGTACTATAGTGAATGCTGATATTTCTACTGGAGCTGCAATAGCTCATTCAAAACTAAGTACGATGTCTGCAGGAAATGTCTTAATAGGCAATTCAAGTAATGTACCTAATTCTACAACTATTAGTGGTGATGTTACTATTACTAGTTCAGGTGTAGTTACTATTGGTAATGAAGCTGTAGGTACTGCAAAGATAGCTGCAGATGCTATAACAGGTGCTAAAATAGCTAACGACGCTATAGATTCTGAGCATTATGTAAATGGATCTATAGATAGTGCTCATATTGGTGATGATCAAATTATTTCAGCTAAGATAGCTGACGACGCTGTAGACTCTGAACATCTTGCTGCAGGATCTATTGATACTGAACATATAGCTGGATCACAAGTTACAGCTGCAAAACTTGCATCTAACTCTGTTACGACAGATAAGATAACTGATGCTAACGTAACAACAGCTAAGATAGCCGATGATGCTATAACCATTGCTAAAGTAGGTTGTGAACAAACAACAATATCTGACAGTGATTCACACATTCCTACATCAGGAGCTGTTATTGATTATGTCTCAGCACAGATTGCCCCTATAGGTGGCCTTGAAGTTATAGCAGATGAAGATAATTTTCCTACAACTCAACCTGCAGCTGGTGTTGTAATATCAATAGCTGATGCAGGTGGTGTAGTATTTAATGGTAGCGGTGTCTCAACTACTGCTAGAACAGCTGGTAATGGATCTGATAACGTAACAATTAACAATGCTCCTTCTAGTCTTTATAGTGAGACTTTAGCAGCCGGTGTTGGTATGCAAGTCAGTTCTACTGGTTCAAGTCATACATATAATTATCATAAGATCTTAGCTAAAGAAGCTGATGTTAAACAATTATCTGATGATATAAACGACTTTAACAGCAGATATCGTATTAATGCAGGAGAACCTGGATCTAATAATGATGATGGTGATTTAGTATGGGATACTAATGCTAATAAAATGAAAGTGTATGATGCTACAGCATCTGCATGGACAGAAGTTACATCGACTGGAGACTTTAAATTCCTTGTTCCTGTGGATGCTGGTACAACTACAGCAGCTACATGGGATGGAAATGATACAAGTTTTGACCTTAAAGAAACAACTAATAGTGGTAGTGCAGCTAGTGTAAGTAATATCAATCAACTTATTGTTAGTTTAAATGGTGTTATTCAGAAACCTAATACTGGTTCTTATGATGCTAGTGAGGAAGGTTTCTATTTAACTGATAGTGATACTATTAGATTTTGTACAGCACCTCCAAGTGGATCAACTGCGTTTATATTACAAATTGGTTCAGCTGTAAGTATTCCTACACCAGGAGATGGTACAGTTACTACTGCTAAGATAGCTAGTGACGCAGTTACTGGTGCAAAGATTGCAGACGATGCAGTTGGTGCTGAACATATAGAATTGTTAGATGCACCTTTGCATATAGCTGATGCTACTAATTTATTAATTGGTACAGGCAGTGATTTGAAACTATGGCATTATAGTGATCATTCTTATATTAGAAATGAAACTGGTAATTTAACTATTGAAGCTAATAGTGCTGGAGATGATGCTATAAAAATAATTCCAGACGGAGCCGTAGAACTCTATCATAACAACCAAAAAAAGATAGAGACAATTTCGAATGGGGCAAGAATATATAGTGAAGATGGTGCAGAAGCAGTACTTGAATATTATGCAGACAGAGGTGATCAGGATGCTGATAAGTTCCGAACATTAGCTTCAGTCAATGCTGATTGGTTTTTACAAAATTACTATGATGGATCTTGGGAAACAAATATAAAAGCCCTTGGTTCAGGATCCGTAGAACTCTATTACGACAACGTAAAAACTTTTGAGACAAATGATAGCGGAATAAAGGTTTTCGGACCTGAAGGTGGTTCTTCTTTTATCTATATGCATGCCGATGAAGGTGACGATAATGCTGATAAATATCACTTACAAGTAGATCAAGACGGTACTGGGTTTTATATTAAAAATGAAGTATCAGGTTCTACAGAAACAAATTTAAGAGCACTTGGTAATGGAGCCGTAGAGTTATATTATGATTCCTCTGTTAAATTTAATACAAGTTCAGATGGGGCAACTTGTCATGGTAGTTTATCCTTTGTTGATAGTAATAAATTAAAATTAGGAACTGGTAATGATTTAGAGATTTACCACAACGGATCTCATAGTTATTTAGCTCAATCAGGTACAGGAAATATAGTTCTTGATGTTAGTAGCGGTCAAGGTACATTTATACAAACAGATAGTTCTAGTTATTCAAATCTTAGTGTAAATAATAGCCATAGTGATGCAGATAGTGTTGATTTCTTCCAATGTAGAGATTCTAGTAATAATTTAAAACTTCAGATTTTATCAGGAGGAGCAGTTCAAAATGCTAATAATATCTATCAACAAATTTCAGATGTTAAATTAAAAGAGAATATTGTTGATGCTAACTCTCAATGGGAAGATATAAAAGCAATTAAAATAAGGAACTGGAACTTTAAAGCATCTACTGGATTAGCTACACATAAACAAATAGGTGTAGTTGCACAAGAAATAGAAACTATTAGCCCTGGTCTTATTGATGAAAATATTGATAGAGATCCAGAAACTCAAGTCGATTTAGGAACTAAAACTAAATCAGTTAAATATTCAATATTATATATGAAAGCCATAAAAGCTCTACAAGAAGCTATGGCAAAAATCGAAACACTCGAAACTAAAGTTGCCGCATTGGAGGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d2e846c3902df010e2225f54c6ee547dce695d35aec4cf221bc598ea8c65ed2c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5829
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage NATL1A-7 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank