Protein

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Genbank accession
XVC02222.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MATLKQIQFKRSKTAGQRPAASVLAEGELAINLKDKTIFTKDDSGSVIELGLKYGGTIDGSLTVNGNIIGNLTGNAATATKLKTARKINGISFDGSKDITLTPSDINVNSTTFIKNNGELPTDANLDTYGPIEEYLGVWSKSTSTNAQPANKFPEENAVGVLEVFVAGQFAGTQRYTVRSGNVYIRSLSAKWNGVDGPWGVWRNVQASTRPLSQTIDLDSLGELEHCGLWRNSSSAIASFDRHYPEEGSAAQGFLEIFEGGLYTRTQRYTTRMGMVYTRCLAAAWDASAPKWEEWKQVGHGTPATFYDGDLNDFKAPGLYNILGTDAVINCPTGEGLPAVIVGLLEVKQRASGGAIFQKFTTAGTGTTTRGRIFERAYTNSVWGAWNEVYTSYSLPITLGMGGVKSQLAELDWNTFDFVPGSMFSVPLNKIKNMPANMDWGTIDGNLILFSVGPSEHTSTGRTVQVWRGTVSQANYRYFVVRVAGNPGNRSFRVRRVVLEDGSHKWTAQQDFNGAVNFGGSTTFKSTTTFNTEVKFRSSNAFRMTASSNYDVIWRADSSRFYLLSTDENDKDGNFNANRPFSYELNTGDVTLGGTTRGSVLKLKRDSLTAFFGGDINMKGLLTFDAGRLGSRDYFKFNHWGDSNNARDNIIQLEDSQGAHFSTERTLATGAIKTRFFGETFTDGTLYLNQMNNSSEQFHINNWGNSEVGRSAVMEVGDSKGYHFYTERRTDNSLTFDVAGTFTVHGSSGITIKNSVGARHIWFKDDSDAEKAVIWATDEGILHIRNNHGGSFSHHFQGAMIKVGERVPYAGDQGLIRGEVSGGAYVNWRDRPAGLLLDCQQSVDSAHAIWKAVDWGRNYIAALDVHCPGDSNNTAAAVLHVQSADYQFNASGEFHATGNGNFNDVYIRSDRRLKENIEDYIGNATDLIGKLKVKTYDKVKSLSDREIIGHEIGIIAQDLQEILPEAINISKIGNLDKPDEVLTISNSAVNALLIKAIQEMSEEIKELKTPFFTKIARKIGKYFKF
Physico‐chemical
properties
protein length:1025 AA
molecular weight: 112696,35430 Da
isoelectric point:6,40930
aromaticity:0,10341
hydropathy:-0,38312

Domains

Domains [InterPro]
DC_0022
STR
1–1019
DC_0022
cd19958
STR
117–203
cd19958 cd19958 cd19958 IPR030392
IPR030392
CHP
909–1011
IPR030392
XVC02222.1
1 1025
Architecture
STR
STR 1-1019 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVC02222.1
1 1025
Domain Start End Length (AA) Confidence
N-terminal 1 378 378 0,4692
Central domain 379 577 200 0,2897
C-terminal 578 1025 447 0,6555
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-378
Central
379-577
C-terminal
578-1025

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TOPO13
[NCBI] 		3425925 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVC02222.1 [NCBI]
Genbank nucleotide accession
PV658497 [NCBI]
CDS location
range 147274 -> 150351
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGTCAACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATTAATTTAAAAGATAAAACAATTTTCACAAAAGATGACTCAGGCAGTGTTATAGAATTAGGTTTAAAATATGGAGGAACAATTGATGGTTCTTTAACTGTTAATGGAAATATAATTGGAAATTTAACAGGTAACGCTGCAACTGCAACGAAATTAAAAACAGCACGAAAAATTAATGGTATATCCTTTGATGGGTCAAAAGATATCACGCTAACTCCATCTGACATAAATGTCAATAGCACAACGTTTATAAAAAATAATGGCGAATTACCTACTGATGCTAATTTAGATACGTATGGGCCCATTGAAGAATATCTTGGTGTTTGGTCGAAATCTACTTCAACAAATGCGCAACCAGCAAATAAATTCCCAGAAGAAAATGCCGTAGGTGTACTAGAAGTATTTGTGGCCGGCCAATTTGCTGGCACTCAGCGTTATACTGTAAGATCTGGTAACGTCTATATTCGTTCCTTATCTGCTAAATGGAATGGCGTCGATGGTCCATGGGGTGTGTGGCGTAATGTTCAAGCGTCAACTCGTCCACTTTCACAAACGATTGACCTTGATAGCTTGGGAGAATTAGAACATTGTGGCTTATGGAGAAACAGTTCAAGCGCAATCGCATCATTTGATCGCCATTATCCAGAAGAAGGATCAGCCGCACAAGGATTTTTAGAAATATTTGAAGGTGGTTTATACACAAGAACGCAGCGTTATACTACCCGCATGGGTATGGTTTATACTCGTTGTCTCGCTGCTGCATGGGATGCTAGTGCACCTAAGTGGGAGGAATGGAAGCAGGTTGGTCATGGCACACCAGCGACTTTCTATGATGGAGATCTGAATGATTTTAAAGCTCCTGGGTTATATAACATTTTAGGCACTGATGCCGTTATTAACTGTCCTACCGGTGAAGGTTTACCAGCCGTTATTGTTGGTTTGCTAGAAGTTAAACAGCGTGCTTCTGGTGGTGCTATTTTCCAAAAATTTACTACTGCCGGAACAGGTACAACTACTCGCGGACGTATTTTTGAGCGTGCATATACTAATAGTGTTTGGGGTGCATGGAACGAAGTATACACATCTTATTCTCTGCCAATTACTTTGGGTATGGGTGGTGTTAAATCTCAATTAGCGGAGCTAGATTGGAACACATTTGATTTTGTTCCTGGCAGTATGTTTAGCGTTCCTTTGAACAAAATAAAGAACATGCCAGCAAATATGGATTGGGGTACGATTGACGGAAACTTGATTCTGTTTTCCGTCGGTCCTAGCGAACACACTAGCACAGGGCGTACTGTTCAGGTTTGGCGTGGTACTGTGTCACAAGCTAACTACCGTTATTTTGTCGTTCGTGTTGCTGGTAATCCGGGAAATAGAAGTTTCAGAGTTCGTCGTGTTGTTCTTGAAGATGGTAGCCACAAATGGACAGCTCAACAAGATTTTAATGGTGCTGTTAACTTTGGTGGTTCAACAACGTTTAAATCAACTACAACATTTAATACAGAAGTTAAATTCCGCTCATCTAATGCATTCCGTATGACCGCTAGTAGTAATTATGATGTTATTTGGCGTGCTGATAGTAGCAGGTTTTATCTACTTTCTACTGACGAGAATGATAAAGATGGAAACTTTAATGCAAATAGACCTTTCAGTTATGAATTGAACACTGGTGATGTTACTTTGGGTGGTACTACTCGTGGTAGCGTTTTAAAATTAAAACGTGATTCTCTCACCGCATTTTTTGGCGGTGATATTAACATGAAAGGCTTGCTGACTTTTGATGCCGGACGTTTAGGATCACGAGATTATTTTAAATTTAACCATTGGGGTGATAGTAATAATGCTCGTGATAACATCATCCAGTTAGAAGATAGTCAAGGCGCCCATTTTTCCACTGAACGTACTTTAGCGACAGGTGCAATTAAAACTCGTTTCTTTGGCGAAACATTTACTGATGGTACATTATACCTAAATCAGATGAATAATAGCTCTGAACAATTCCATATCAATAATTGGGGAAATTCAGAAGTTGGTCGCTCGGCAGTGATGGAAGTCGGTGATTCCAAAGGTTATCACTTCTATACAGAACGCAGGACAGATAACAGTTTGACGTTTGATGTTGCTGGCACTTTTACCGTGCATGGATCTAGCGGGATCACTATCAAAAACTCTGTTGGTGCTCGCCACATCTGGTTTAAAGATGATAGCGATGCAGAAAAGGCTGTTATCTGGGCTACAGATGAGGGTATTTTACATATTCGCAATAATCATGGGGGTTCATTTAGTCATCACTTCCAGGGCGCAATGATTAAAGTGGGAGAGCGTGTTCCTTATGCCGGAGATCAAGGGCTTATTCGCGGTGAAGTTTCTGGTGGTGCTTATGTGAATTGGAGAGATCGCCCTGCTGGTTTGTTGCTTGACTGTCAACAAAGCGTTGATAGTGCTCATGCTATTTGGAAAGCGGTTGATTGGGGGCGTAACTACATCGCTGCTCTGGACGTTCATTGTCCCGGTGATAGTAATAATACTGCGGCAGCGGTTCTCCATGTTCAGTCTGCTGATTATCAATTCAATGCAAGTGGAGAATTTCATGCCACTGGTAACGGAAACTTTAACGATGTTTATATTCGATCAGACCGTCGCCTCAAAGAAAACATCGAAGATTATATAGGAAATGCAACTGATTTAATCGGTAAACTGAAAGTTAAAACCTACGATAAAGTTAAATCATTATCCGACCGTGAAATTATCGGTCATGAGATCGGCATTATCGCGCAGGATTTACAAGAAATATTACCAGAAGCGATTAATATTTCGAAAATTGGCAATCTTGATAAACCAGACGAAGTTCTGACAATTTCTAACTCCGCTGTGAATGCTCTTTTAATTAAGGCCATTCAGGAAATGAGTGAAGAAATTAAAGAATTAAAAACGCCTTTCTTCACTAAAATTGCTCGCAAAATTGGTAAATACTTTAAATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ebc88be7eae03ad7c1e5ecf74277bb5cdf2c8bb87c009821fa27937820f1417
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6136
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50