Protein

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Genbank accession
QXV85443.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPEGIYIDYNDGRPAMEITSGLRALSFCAKFDQRCQSDQTLVINTPLTNGSEIFVIPTRPVEIIEVYDQGLVVASPFYISSISRNGNSGVVLRGGNPFGYTGKLPQWAGSIMEVLPAANYNTGLYVSNSTDFTAISNNAKLMTCQYAGTVTVNGSLQLPVSGIPFARWSDPNVSVGFDGSNIIVRNIAYTGRDDVAGSVTMELVIFNNTPPSPGDGITMTNNIGQVTFSTVRKPFLFDRTLILSGSNQDIGNRLIQLAFYGMRNVYNGGYDHVRYNGVYMYNNQVRAERNKVIGNFYSPSLRPPERNIIIPTPAIAIPNMY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 35162,42290 Da
isoelectric point:6,59238
aromaticity:0,10280
hydropathy:-0,09875

Domains

Domains [InterPro]
IPR045604
STR
4–296
IPR045604
QXV85443.1
1 321
Architecture
STR
STR 4-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV85443.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,1899
Central domain 85 283 200 0,0565
C-terminal 284 321 37 0,9708
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-283
C-terminal
284-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VogelGryff
[NCBI] 		2851989 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV85443.1 [NCBI]
Genbank nucleotide accession
MZ501110 [NCBI]
CDS location
range 17827 -> 18792
strand -
CDS
ATGCCAGAGGGTATTTATATAGACTACAATGACGGTAGACCTGCAATGGAAATAACATCAGGTTTACGGGCCTTGTCCTTTTGCGCTAAATTTGATCAGCGCTGTCAATCCGATCAAACGTTAGTCATTAATACCCCTCTCACTAACGGGTCTGAGATTTTTGTAATTCCAACAAGGCCAGTTGAAATTATTGAAGTTTACGATCAAGGTTTAGTTGTCGCATCACCTTTCTATATATCCTCTATTTCCAGGAACGGTAATTCTGGAGTTGTCTTAAGGGGTGGTAATCCTTTTGGGTATACCGGAAAACTACCGCAATGGGCGGGTTCAATTATGGAGGTATTACCTGCCGCCAATTATAATACAGGTCTATATGTATCTAACTCTACGGATTTTACAGCAATCTCTAATAATGCAAAGCTAATGACTTGTCAATACGCTGGTACGGTTACAGTCAATGGCAGTCTGCAACTACCTGTATCCGGTATCCCGTTTGCAAGATGGAGCGATCCAAACGTTTCTGTTGGCTTTGATGGTTCTAACATTATAGTCCGCAACATTGCGTATACGGGTCGAGACGACGTTGCTGGTAGCGTTACAATGGAGCTGGTAATCTTTAATAATACTCCACCGTCACCTGGCGACGGTATTACAATGACAAACAATATTGGGCAAGTCACATTTTCTACAGTGAGAAAACCATTCTTATTCGACAGGACTTTAATTTTATCGGGAAGTAACCAAGACATAGGTAACAGGTTAATTCAGCTTGCTTTTTACGGTATGCGCAACGTCTATAATGGCGGGTATGACCATGTTCGTTATAATGGCGTTTATATGTATAATAATCAGGTAAGAGCTGAAAGAAATAAAGTGATTGGTAACTTCTATTCCCCTTCTTTAAGACCACCAGAAAGAAATATTATCATCCCTACTCCAGCTATCGCTATACCAAATATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d2a62ff093444c5d9b544ecb9b58976ab55dfa35ece059e804ad676a7363201f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank