Protein

View in Explore
Genbank accession
QZB87927.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MLDEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAKTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELNTNPPPVVIETATTTTVTEMEYVNGQFLAKIPKNDDFDYFVDLTLPHDVTFGINVSFPTVGGVTVTRDITLSGRLISATETDDGGIPPENYWYTFIITNIDYSGNQLVSSLDGVTINNNYFTISDNQAIVSGPYFSPIEGDQLWVHLQHQTNDGNDFSVLIEWWKIDDDNVQIPGTYQSMSYYKDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRTNVSYPDDTVVKVVVRATENATGSRDRKYNALITRHTIGYDRDTGKVRYTIAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDCTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDNGIVEGEPTKAKKFDMLYIRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNVFTTSEQLTADDNLYVVITSSDGSTSDRLPATVTGLHTFTCNLPTDFQLNIWDGASVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYVIPSS
Physico‐chemical
properties
protein length:784 AA
molecular weight: 87964,37770 Da
isoelectric point:4,43631
aromaticity:0,10587
hydropathy:-0,41633

Domains

Domains [InterPro]
DC_0118
STR
1–626
DC_0118 DC_0808
NF040662
Unmapped
312–778
NF040662
QZB87927.1
1 784
Architecture
STR
RBD
STR 1-626 | RBD 642-783 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage seszw
[NCBI] 		2865759 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZB87927.1 [NCBI]
Genbank nucleotide accession
MZ375325 [NCBI]
CDS location
range 16857 -> 19211
strand +
CDS
GTGCTTGATGAAGATGATGAGCTTTCATTCTGTCTGCGCGATGGCGACGTGGTCAACGTTTATTGCCAGCCGTCCGGCGCAATTGGCGACCTTATCGGTGCGATACTGAAACCAGTAACGAAGATTTTCTCATTCCTTACGCCGAAAGTATCCACACCAAAAACTGATACCAGCTCAAAAACATCACCGAATACCAGCCTAAAGGCGAAAACCAACATTGCGCGCAACGGCGAGGCGCGTCCTGATAACTTCGGGCAGATTCGCGCATTCCCTGATTTGCTTCAGGAATCATTATTTGAATACATCAACAATATTAAATATGTCACAGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTATCATCCGTGCGTTATTCTGAGTCAAACCTCGGTTCACTGGCTGGCGCTAGCTATACAATTTATCAGCCGGGAGAAGTTATTCCTGTTGTGTATGAACCTTACGCATTTGATGATGTTGACGGTCAGGAACTGTACGGGCCAAACGAACTTAACACCAACCCTCCGCCAGTGGTCATTGAAACTGCAACAACAACCACGGTAACGGAAATGGAATACGTCAATGGACAATTCCTTGCGAAGATACCAAAAAACGATGATTTTGATTATTTCGTTGATCTGACATTGCCGCATGATGTTACATTTGGCATTAACGTATCATTCCCTACAGTAGGTGGAGTTACTGTCACCAGAGATATAACATTGTCTGGAAGGTTAATTTCAGCTACAGAAACTGACGACGGAGGTATACCACCGGAGAACTACTGGTACACATTTATAATTACCAATATAGATTACTCTGGCAATCAACTTGTATCATCACTGGATGGAGTAACCATTAACAATAATTACTTTACTATTTCTGACAATCAAGCCATTGTTTCCGGTCCATATTTTTCGCCAATTGAAGGTGATCAGTTGTGGGTGCATCTTCAGCACCAGACCAATGACGGCAACGATTTCAGTGTGCTCATTGAGTGGTGGAAGATTGACGATGATAACGTTCAGATACCAGGTACATATCAGTCGATGAGCTATTACAAGGACGTAGACCGGAATGACACATTCTACTACACGATAAAATTAACCCCATCAGCTGGCACTGGTCGCTACGCGATTCAGATGCGACGGACAAACAACAGCTCCGACACATCAATCCTCCAGCTTGAGGAGATTCATTCAATCGTTACGCGCACCAACGTTTCGTACCCAGATGACACCGTGGTTAAGGTCGTCGTGCGAGCAACAGAGAACGCCACAGGGAGTCGTGACAGGAAATATAATGCACTTATTACGCGTCATACAATCGGTTACGACCGCGACACTGGCAAGGTGCGCTACACGATTGCACCATCCCGTAGCTTTGCTGATGCTGTTTTGCATAACTGGCTAATTACCGCTGGCAATCCAGAAAACACGATAGACATCGTGAAGTTGTATGAAATTGCCGATAGCCTGCCTGATGAGAGATTGGGTTATTTCGATTGCACGTTTGATGATGAGGATAAGTCAATCGGCGAGCGCTTGCAGACCATCTGCGATGCGGCGCGTGTTACTGCATTCTGGGATGATGGAGTGATGAGCTTCTCGCGTGATGAAAAGAGAGAATATCCGGCAACTGTATTTAATACCAGAAACACGCAGAGTGACGGTTACAAGCTGAGTTATGATATCAGTCTTCCAGGCACTTATGATGGCGTTAACGTCGAATATCGCGACCCAACAACGAATAAGCAGGCCAACGTTTACTATCGCATTACAGATAATGGAATTGTCGAAGGCGAGCCAACAAAAGCAAAGAAATTCGACATGCTTTATATTCGCAATCGTTATCAGGCTGTTGACCGCGCAATTCTTGAGTGTCGTCGCCTGATTTACTCCCGTCGCAGCATGGAGATTAAGGCTCTGGCGGATGGCGAATGGGTCAACGTAGGCGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAGCGCGCAACGGAAACGTATTCACAACAAGCGAGCAACTAACGGCTGATGATAATCTTTATGTTGTGATTACCAGTTCTGATGGCAGCACATCAGACAGATTACCAGCAACAGTGACCGGATTGCATACATTCACCTGCAACCTGCCGACTGATTTCCAGCTGAATATATGGGATGGAGCAAGCGTGCAATCTGAATCTCGCTATGTGCTTAGCACTGAAAAAGAACTGGATACCACTCTGTGGGTTGTCAGCCAGAAAAATCCAGGAAGTGACGGTACAACAACTCTGACCATGAGCGAATACAGTGATGACATGTACGAATATGTCATCCCGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
02840a1e2221d77d690e500d01db46d834ca2ecf8bccde66712a3332698c3bf4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3026
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome-scale top-down reduction of phage to generate viable minimal phage genome Yuan,S. and Ma,Y. 2021-07-13 — GenBank