Protein

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Genbank accession
YP_008241791.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MSRITLTISNKTPSSGEPSLIASFNVRFNYGVSDIVLDLVLTSSAGVGRFAWSTDLATSSANYAFAFNRDYKNVGGTNNLTATVVAYNQIAIESKVGVFLDAETDSNVAGLEYKIDTTIPVVDKLLLAITKQSTGDCSGVNYTAIATGGTKPYTLRVNNGALLSSNWDGSLLSFSLSRGTLHGVKITDATGDQNTQTANVPRNLNASEFTVSQVLSNGATNLSIANTNVVSGTTPITYSIDNVDYQTSTDFIGLPDDTYTIRIKDTYGCITTKEVVVLNEVIPVEEEATQYNHLFVSNFNSIAFSPKETFSAFNKKNFDNTLSYSEYIKADNSITQQFIEGDVDSYGIGTQFQSSYPYNKITIHNCDGSKVDIPSIMIQENIGTYEKVDCMLFPVSTGIGVYFDGGSAYDPNTDTVIGASDYISALPDWAVSGERVEITNFGVKEIIGFGYDSDLDRNYFIVSGSIGSITASKIQVKYDIQEYNLFEFYLNMSLVSNKAVITIEGGFSFNEINKTWVSECIEKIEDTDEHLLIRWSSYKNVGEMVFASGIQGVMRIKGKIRAYAKGESEVSETDSGSYPLRQSATLGQRVSIPYATPKIWDKLNAVSGISIVGTLTINGIELVRNSEIEQEEKGDSNISEVTMTFDYGYNYLISRQDEIVLNVSTGVEGAGGGEYDPINIVPFDNKTRIVDSSGKFITVGGSFATLN
Physico‐chemical
properties
protein length:707 AA
molecular weight: 76948,72100 Da
isoelectric point:4,52066
aromaticity:0,10042
hydropathy:-0,13296

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008241791.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 296 296 0,6285
Central domain 297 696 401 0,6163
C-terminal 697 707 10 0,1182
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-296
Central
297-696
C-terminal
697-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi19:1
[NCBI] 		1327970 Uroviricota > Caudoviricetes > Assiduviridae > Cellubavirus phi19una >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008241791.1 [NCBI]
Genbank nucleotide accession
NC_021799 [NCBI]
CDS location
range 44226 -> 46349
strand +
CDS
ATGAGCAGAATAACATTAACAATAAGCAATAAAACACCATCAAGCGGCGAGCCTTCATTAATAGCTTCTTTCAATGTTAGATTTAACTACGGAGTGTCTGACATTGTACTTGATTTAGTTCTTACATCAAGTGCTGGTGTAGGTAGATTTGCATGGAGTACAGATTTGGCAACTAGTAGCGCTAATTACGCTTTCGCATTCAATAGAGATTATAAAAACGTCGGTGGAACAAACAACCTTACTGCGACCGTAGTAGCATACAATCAAATTGCTATAGAATCTAAAGTAGGTGTCTTTTTAGATGCAGAAACAGACTCAAATGTAGCTGGATTAGAATACAAAATAGACACCACAATTCCAGTTGTTGACAAGTTATTGTTGGCTATTACAAAGCAGTCTACAGGTGATTGTTCTGGTGTTAACTACACAGCAATAGCTACGGGTGGAACAAAACCGTACACTCTTAGAGTTAATAACGGTGCTTTATTGTCATCTAATTGGGATGGTTCTTTGCTGTCTTTCTCGTTGTCTAGAGGAACTTTACATGGCGTAAAAATTACAGACGCAACTGGAGATCAAAACACACAAACGGCAAACGTTCCTAGAAACTTAAACGCTTCTGAGTTTACAGTCTCACAAGTTTTGTCTAACGGAGCTACAAACCTATCTATAGCAAACACTAACGTTGTATCTGGAACTACACCTATAACGTATTCAATTGATAATGTAGACTACCAAACAAGCACAGATTTTATAGGATTACCAGATGACACATATACAATTAGAATAAAAGATACTTATGGATGCATAACAACTAAAGAGGTTGTTGTGTTAAACGAAGTAATACCAGTAGAAGAGGAAGCAACTCAGTATAATCATTTATTTGTAAGCAACTTCAATAGTATTGCGTTTTCACCTAAAGAAACATTTAGCGCATTCAATAAAAAGAATTTCGACAATACACTTAGCTACTCAGAATATATAAAAGCTGATAACTCTATAACGCAACAATTTATAGAAGGAGATGTAGATAGTTATGGTATTGGAACACAATTTCAATCCTCATACCCTTATAACAAAATTACTATTCATAATTGTGATGGTTCAAAAGTAGATATTCCATCTATAATGATTCAGGAAAATATAGGAACATACGAGAAAGTAGATTGTATGTTGTTTCCTGTTTCTACTGGAATAGGAGTTTATTTTGACGGTGGCAGCGCTTACGACCCAAACACAGATACAGTAATAGGGGCTAGTGATTACATATCCGCATTGCCTGATTGGGCTGTTAGCGGTGAGCGTGTAGAAATAACAAATTTTGGAGTTAAAGAAATTATAGGGTTTGGATATGATTCTGATTTAGATAGAAATTATTTTATTGTTAGTGGTTCTATTGGATCAATAACAGCATCTAAAATACAAGTTAAATATGACATTCAAGAATACAACCTATTTGAGTTTTATTTAAACATGTCTTTAGTTTCTAATAAGGCTGTTATAACTATAGAAGGTGGTTTTTCTTTTAATGAAATAAACAAAACATGGGTTTCTGAATGTATTGAAAAAATAGAAGATACAGACGAACACTTGTTAATTAGATGGAGTTCTTACAAGAATGTAGGGGAAATGGTTTTCGCTTCTGGTATTCAGGGTGTAATGAGAATAAAAGGTAAAATTCGTGCGTATGCTAAAGGAGAATCCGAAGTAAGCGAAACCGATTCTGGAAGCTATCCACTAAGACAATCAGCCACATTAGGTCAAAGAGTTTCGATACCTTATGCAACTCCTAAAATTTGGGATAAATTAAATGCGGTTAGTGGTATTTCAATCGTTGGAACATTAACAATAAACGGTATAGAATTAGTTCGTAATAGCGAAATAGAACAAGAAGAAAAAGGAGATAGCAATATTTCAGAGGTTACAATGACTTTTGATTATGGTTATAACTATTTAATAAGTAGACAAGATGAAATTGTATTAAACGTTTCTACAGGAGTAGAAGGCGCTGGAGGTGGTGAATATGATCCGATAAATATAGTTCCTTTCGACAACAAGACAAGGATTGTAGATTCATCAGGTAAGTTTATCACCGTCGGGGGTAGTTTCGCTACCCTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b344948105cfdb2085908dbf40ca71c7697986d27a5be7f146b30b56ddc5ac8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50