Protein

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Genbank accession
VOH54469.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKLGKFNHNGNLHIKYRPAPLVDVGPVLQYKFLANEPLDEATESMSISSGTVSIQNSSLYTSGSTVNNYFYRKLPSILKNTKFTIELTIRSEGEIPSTSNIIGTWNPSNEFWLLSVINNNLVFQWNNGTATAGTRQVFTFSNVQVPSDQDVHLAVCRDDTMLYGFVNGQLAGSFEVSFAGHTNVVSGSIFSTRSMATTNNYFNGYRKNIRIVNDKALYVAPFTLSSVTMADVKPEYYTPEDASLVVGQITCKRNSLFQETMNTPTLLLTGLSNSTTGRFVTTTNNTSGFQFSPVTNWQSGDYTIELYINLSTVGAGGAILIGQWTSSGGTDIGWSISMQQNGSVRHFYSTDGIYDQANGNSGVLQAPNGTLVLNKDTHVCAMRKNGVIGLFVDGVRLAQVNEARPLWNSQIPIRNTWTAPADGYALAERWNIRCISKAMYDIDGFVPPVRLPTFPNLLTNTGSYLRSVLSGTTTTADAMGNIIQFNSSGQTSGGGYQKYFIYGSKKVEIIGNTISSDSTQQMRYGLTNTTPTTFAESESDFNSGTFPYAYADRINSVIQIVKQGSVIGSLPHSTANHTFKITYDFENNQFTYEVTSGTAQGQSVTTSLDSTITQNTKFAVCGTKSNIQITSVKIQQ
Physico‐chemical
properties
protein length:636 AA
molecular weight: 69536,86720 Da
isoelectric point:7,07670
aromaticity:0,10377
hydropathy:-0,23208

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
26–217
G3DSA:2.60.120.200 G3DSA:2.60.120.200 DC_0816
IPR013320
STR
58–214
IPR013320 IPR013320
IPR013320
STR
58–225
IPR013320 PF13385
PF13385
LEC
77–214
PF13385
DC_2085
STR
179–424
DC_2085
VOH54469.1
1 636
Architecture
STR
RBD
STR 26-425 | RBD 426-636
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VOH54469.1
1 636
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,1847
Central domain 133 331 200 0,2312
C-terminal 332 636 304 0,8684
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-636

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_MIJ3
[NCBI] 		2567864 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VOH54469.1 [NCBI]
Genbank nucleotide accession
LR588166 [NCBI]
CDS location
range 121546 -> 123456
strand +
CDS
ATGAAATTAGGAAAATTTAATCATAACGGAAATTTACATATAAAATATAGACCGGCACCGTTAGTCGATGTAGGTCCTGTCCTACAATATAAATTTCTAGCAAATGAACCATTAGACGAAGCAACAGAATCGATGTCAATTTCGTCTGGCACAGTTTCTATACAAAATAGTTCGTTGTATACTTCCGGCAGCACAGTAAACAATTATTTCTATAGAAAATTACCTAGTATACTTAAAAATACCAAATTTACAATAGAACTGACAATAAGGTCAGAAGGCGAAATTCCGTCTACTAGTAATATAATAGGTACATGGAATCCATCTAACGAATTTTGGTTGTTATCTGTAATTAACAACAATTTAGTATTTCAATGGAATAATGGAACTGCTACTGCCGGTACTAGACAAGTATTTACATTCAGTAATGTACAAGTACCTTCAGATCAAGACGTTCATTTAGCCGTATGTAGAGATGACACTATGTTATATGGATTTGTAAATGGACAACTAGCAGGTTCGTTTGAAGTGTCATTTGCAGGGCATACTAATGTTGTATCGGGGTCTATATTCTCTACAAGAAGCATGGCCACCACAAATAACTATTTTAATGGATATAGAAAAAATATTAGAATAGTAAATGACAAGGCATTATATGTTGCACCATTTACACTATCTAGCGTAACTATGGCTGATGTAAAGCCAGAATACTATACCCCGGAAGATGCTAGCTTAGTAGTAGGTCAAATAACATGTAAACGAAATTCATTGTTCCAAGAAACTATGAATACTCCTACTTTACTACTTACAGGTTTATCTAATTCTACAACAGGACGATTTGTAACAACTACTAATAATACTTCTGGCTTCCAATTTTCTCCTGTAACAAATTGGCAATCGGGCGATTACACAATAGAATTATATATAAACTTATCTACAGTAGGCGCAGGCGGTGCCATACTAATAGGTCAATGGACATCTTCGGGTGGCACTGACATCGGATGGTCTATCTCTATGCAACAAAATGGAAGCGTCAGACATTTCTATTCCACCGACGGAATATACGACCAAGCAAACGGTAACTCTGGAGTATTGCAAGCACCTAATGGTACTTTAGTATTAAACAAAGATACCCATGTATGTGCAATGCGGAAAAATGGGGTAATAGGATTATTTGTAGATGGTGTTAGACTAGCCCAGGTAAACGAGGCAAGGCCGTTATGGAATAGTCAAATACCCATTAGAAACACATGGACTGCGCCAGCAGATGGATATGCATTAGCAGAACGTTGGAATATAAGATGTATTTCTAAAGCAATGTATGATATAGACGGTTTCGTTCCACCGGTTCGTTTACCTACATTTCCCAATTTATTAACAAATACAGGTAGTTATTTGCGCTCTGTATTGTCTGGCACAACTACTACAGCAGATGCTATGGGAAATATTATACAATTTAATTCCTCCGGACAAACATCCGGTGGCGGCTATCAAAAATATTTTATATATGGTTCTAAAAAAGTAGAAATAATAGGAAATACCATATCTTCGGATTCAACACAACAAATGAGATATGGTTTAACAAACACAACTCCTACCACATTTGCAGAGTCAGAATCTGATTTTAATTCCGGTACATTCCCATATGCGTATGCCGATAGAATTAACAGTGTCATTCAAATAGTTAAACAAGGTAGTGTTATAGGTAGTTTGCCTCATTCTACTGCCAATCACACCTTTAAAATAACATATGATTTCGAAAATAATCAGTTTACTTACGAAGTTACTTCTGGCACTGCACAAGGACAATCTGTTACTACAAGTCTAGATTCTACAATAACACAGAATACTAAGTTTGCAGTATGTGGGACCAAATCTAATATACAAATAACTTCTGTAAAAATACAACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62e350614c802cac5fd61f78e5d4280707a8073a7b36e2fbd5734755918810a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50