Protein

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Genbank accession
AMO43628.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNAIQTEVSDGSLVSVNVGLEYFEQSDISVFLDLSIAPLIEGTDYAWANATRIDFLTGPVAAGVAVTLVRNTENEAMLNIYDGGAPFNRFTLDENFLQLLRLSQEFSEGLGLTGLRQALDMHGYRIFNLGNPVNAQDATTKAYVDLLIQTLVESGTGPIGAASNVVYIDPEGQLKNLQQLSGLDGADLIGWNGTGLGPFLEAGYYEPQGLDLTGVVDESAVINAALVKYKRVRLPAGTIKANVLVPSGCTLRGAGKTRLNRSTKVWAAGGTTIIGSVVASNQINWTVTDMNIDGFAGGNAFGAQGPSTEFGYIGRVAMRGSDHNMILEQNGSDLAGRFGGNILVEDCDAYDGPNGFAVKMRNVTFRRCYAYDITVQGFVAVSDNINGPAIYSRAQNVRFEDCGGDSCNQGFVVYSRDFYHGNFPGSWVATVSPATDIYWDGTVTNVTSGQVHIGDFSSDGTFAIVFNNEIEIGGGHYQHSPLFGVRFDWAARPKVTGGHFSGCPNPIVRGTNVVDLKIGDGVTRFGAINPGILSERIIESSNTSAVNIQNVRQVLVFQNTVPTVVTSLVTPDTNHTIDVVIDDGVTSLQLAGILLTGRGSRARFQWSADTSTWLCLMSGSVLPPGEIAVPYALSMSADWRALANSIAMNGNINLLDVPVANIAPGTVAHLRIVNVAGGSRSVFNWSGVTWGAITPVAAIAAGATVLMTLYHNGSTWLVKSAQTF
Physico‐chemical
properties
protein length:724 AA
molecular weight: 76998,68850 Da
isoelectric point:4,87186
aromaticity:0,08840
hydropathy:0,08619

Domains

Domains [InterPro]
DC_1609
STR
1–324
DC_1609
IPR005604
ATT
6–105
IPR005604 IPR012334
IPR011050
STR
214–552
IPR011050
AMO43628.1
1 724
Architecture
ATT
STR
ATT 1-105 | STR 106-552 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMO43628.1
1 724
Domain Start End Length (AA) Confidence
N-terminal 1 218 218 0,9942
Central domain 219 534 317 0,9959
C-terminal 535 724 189 0,8986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-218
Central
219-534
C-terminal
535-724

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YMC11/06/C171_PPU_BP
[NCBI] 		1777063 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Kantovirus
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
f05dfd478921867c7a77d9191171e330f2daad03dfea28fc7b5f0a4b5b9ea8c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7350
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50