Protein

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Genbank accession
YP_012086875.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALNGTKYTAFARHRLVLEWRANQNIAGNYSTISVWLYLQSMDKWGRLDAPAIGDAKVTVEGTTQTEKASSMLNAFQKKLLLAKEWRVNHNNDGSKRITIGGSYFVNVTFTDNGVSTYYGTITIPNFSVDLNRIPRRSSLNPVPTLNLPGNLPITINRQSSTFKHNLTAWVANRDNPTLNNDAHWTYLTNLNDVGTSGAFSFTVANNKTIFTALNNRTSWQGKVKLWTIGLDDVVSQERTYKIVPPMNAQASGGKITLNVGEKINVSLSNYRSDANFTYDGVFNISGLNIPIATNSAGNTMSYTLTQTDVDNILKKIPNADSSWGQVTVTSKYSGVQYRTPWTGQRIDITIPKNKYVPSINGTPTYEDTSKVSVGLTGNNQVALQGKSNIKVTIPANFATANGYSTLKTIDVSLGGTSKTINYSNAETVVELGAPANHTSDTLIVTVTDSRGFKSNWTKHVDIYPYENPNMDFTVARRNNFETTTDINVNSTWSPITIGGVNKNAIQSVTYATKVAGVGTYGAETALNFTANGSMVTVKNTPIELDNTNTYEVRLSVTDKFSTFTRTATVKPGNPIMFIDADNRSLFLGNAFVDNNNNGLRGVLEIERDKWQDRGLVGISLNNSDISAVNGIWFSTDTSDNAGEGIHFIKSGKSRNSLTWDDYDYFYMRDNGFYVNHNTTPIFNVSDGGVMTFPTAQLWKGAAYLNEKQEVLPSKKLTDCRNGWVLIFSAYESGAGQPWDIAQVYIHKSVLNQFNTRGFRAMIGHGTTITHKYMYITDGRIGGHVNNGTGVNSGIVIREVSEW
Physico‐chemical
properties
protein length:803 AA
molecular weight: 88478,77860 Da
isoelectric point:9,06208
aromaticity:0,09963
hydropathy:-0,37136

Domains

Domains [InterPro]
DC_1676
ATT
4–126
DC_1676 DC_0631 IPR008577
IPR008577
STR
22–175
IPR008577 DC_1167
YP_012086875.1
1 803
Architecture
ATT
STR
STR
ATT 4-126 | STR 127-175 | STR 181-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012086875.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,0381
Central domain 141 387 248 0,8010
C-terminal 388 803 415 0,5518
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-387
C-terminal
388-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_OCPT_Bob
[NCBI] 		2922318 Uroviricota > Caudoviricetes > Herelleviridae > Kochikohdavirus > Kochikohdavirus bob
Host Enterococcus sp.
[NCBI] 		35783 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012086875.1 [NCBI]
Genbank nucleotide accession
NC_106554 [NCBI]
CDS location
range 77392 -> 79803
strand +
CDS
ATGGCTTTAAACGGAACAAAGTATACAGCCTTTGCCCGACATAGATTAGTTTTAGAGTGGCGTGCAAATCAAAACATTGCAGGGAACTACTCAACAATCAGCGTATGGCTATACCTACAATCTATGGATAAATGGGGTAGACTTGATGCTCCCGCTATCGGTGATGCCAAAGTTACCGTAGAAGGAACTACACAGACAGAAAAAGCTTCCTCTATGTTAAATGCTTTCCAAAAGAAACTATTACTAGCTAAAGAGTGGAGAGTTAACCATAATAATGATGGTTCTAAAAGAATAACTATTGGGGGTAGCTACTTTGTAAACGTTACTTTTACTGATAACGGTGTATCAACATATTATGGTACGATAACTATACCTAATTTTTCAGTAGACCTAAATAGAATACCTAGAAGAAGTTCGTTAAACCCTGTCCCTACATTAAATTTACCGGGGAACTTACCAATAACAATAAATAGACAGAGCTCCACATTCAAACATAATCTAACTGCTTGGGTGGCTAACAGAGATAACCCCACATTAAACAATGATGCCCATTGGACGTACTTGACAAACCTTAATGATGTAGGCACTAGTGGTGCGTTTAGTTTTACAGTAGCAAATAACAAAACTATTTTTACTGCATTAAACAATAGAACTAGTTGGCAAGGCAAGGTCAAACTCTGGACTATAGGGTTAGATGATGTAGTTAGTCAGGAAAGGACATACAAGATTGTTCCTCCAATGAATGCACAGGCATCGGGAGGTAAGATAACCTTAAATGTGGGAGAGAAAATCAATGTATCACTAAGTAACTATCGGTCTGATGCAAACTTCACTTATGATGGGGTATTCAACATTAGTGGGCTTAACATACCTATTGCTACAAATTCAGCAGGGAATACGATGTCGTATACACTAACTCAAACAGATGTAGACAATATATTGAAGAAAATACCAAATGCGGATTCCTCGTGGGGTCAAGTAACTGTAACAAGTAAGTATAGTGGAGTACAATACAGGACTCCATGGACAGGACAGAGAATAGATATAACTATACCTAAAAACAAGTATGTACCAAGCATTAATGGTACCCCTACTTATGAAGATACAAGTAAGGTCTCTGTCGGGCTTACAGGTAATAATCAGGTAGCCCTTCAAGGTAAATCTAATATCAAAGTAACCATCCCTGCTAACTTTGCAACGGCTAACGGTTACTCTACTTTGAAAACAATTGATGTGTCTTTAGGTGGTACATCAAAAACAATCAACTATTCAAATGCAGAAACAGTTGTAGAATTAGGAGCACCTGCTAACCATACATCAGATACATTAATAGTCACAGTAACTGACAGTCGTGGGTTTAAGTCTAACTGGACAAAACATGTAGACATTTATCCCTATGAAAATCCAAATATGGACTTTACAGTCGCACGTAGAAATAACTTTGAGACAACGACAGATATTAATGTTAATAGTACATGGTCTCCTATCACTATAGGTGGTGTAAACAAAAATGCTATCCAATCAGTAACCTACGCAACAAAAGTAGCAGGTGTTGGTACTTATGGAGCAGAAACGGCTTTAAATTTTACAGCTAATGGCAGTATGGTAACAGTAAAAAATACACCAATAGAATTAGATAATACCAATACATACGAAGTTAGGTTGAGCGTAACTGATAAGTTTAGTACGTTTACTAGAACAGCTACTGTTAAACCGGGTAACCCTATCATGTTTATTGATGCTGATAATCGAAGTCTGTTTTTAGGTAATGCCTTTGTTGACAATAACAATAATGGGTTAAGAGGCGTATTAGAGATAGAAAGAGATAAGTGGCAGGATAGAGGTTTAGTAGGAATATCCTTAAACAACAGTGATATATCAGCAGTCAATGGTATATGGTTCTCAACAGATACATCGGATAACGCAGGTGAAGGGATTCACTTTATTAAATCAGGTAAATCAAGAAATTCACTGACTTGGGATGACTATGATTACTTTTATATGAGGGACAATGGATTCTATGTTAACCACAATACTACACCGATATTTAATGTCTCCGATGGGGGTGTTATGACGTTCCCTACAGCTCAGCTTTGGAAAGGGGCTGCCTATTTAAATGAGAAACAAGAAGTCCTACCTAGCAAAAAACTAACGGATTGCCGAAACGGATGGGTTTTAATATTCTCAGCATATGAGTCAGGTGCAGGGCAACCTTGGGATATAGCGCAGGTATACATCCATAAGTCTGTGTTAAATCAGTTTAATACAAGAGGATTTAGGGCTATGATAGGTCATGGAACTACAATAACCCATAAATATATGTATATAACTGATGGTCGTATAGGTGGGCATGTTAACAATGGGACAGGAGTTAACAGTGGCATTGTCATAAGGGAGGTATCAGAATGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9d4dde887991abc2ef086521050a52cbf80071bf856c8d71afe35872deace11a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage cocktails constrain the growth of Enterococcus Wandro,S. — — GenBank