Protein

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Genbank accession
WAK44885.1 [GenBank]
Protein name
putative tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MGLISQSVKNLKGGISQQPDILRFPEQGAEQVNGWSSETEGLQKRPPTVFTKTLGGVNHLSYEGRKPLIHLINRDENERYYVAFHGGGIKVHTLEGREIPVGGDQSYVVCQNPRDDLRMVTVADYTFVVNRNYVVRGNGAINYNLREDGDAIVNIRGGQYGRTLSIAINGTNPQATVKIADGKEAPEVQQTDAQWLVQQLVGQLRTNLQGWGINEGSGFIHIIAPANDSIRQIETKDGYGNQLMNAVMHQSQSFAKLPVEAPAGYVVKIVGDTSKTSDAFYVQYDATRKVWKEVAGWGIESGWNPATMPHALVRKADGNFELMQLDWNTRTCGDNDTNPFPSIKDSTINDVFFFRNRLGFLSGENIIMSKTSKYFNLFPSSVANLSDDDPIDVAVSHNRISVLKYAVPFSEELLLWSDQAQFVLSASGILSPKTVELNLTTEFDVSDRARPFGIGRGIYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYVPNGVFSIRGSGTENFVSILSSSAPSKIFIYKFLYLNEEIAQQSWSHWDFGKDVEVLAADSIGSTMHILARNKSHTYMCRLNFTKNSIDFGDEPYRLYVDHKTKIRISPSAYDDDQYRTRVFLTDHYGMNFWTGDVYVVALDGQVHKFSPPAGGWPTGHPEIYLNGNWGNQDVFVGFAIPFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWLNYEESGAFDIEVKNTSRLFKYTMAGARLGSNALRVGGLNVGTGQFRFPVVGNAQLNIVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 88512,33030 Da
isoelectric point:6,40606
aromaticity:0,10943
hydropathy:-0,32579

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
WAK44885.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAK44885.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9921
Central domain 144 347 205 0,0910
C-terminal 348 795 447 0,2506
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-347
C-terminal
348-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_57
[NCBI] 		2996118 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAK44885.1 [NCBI]
Genbank nucleotide accession
OP764599 [NCBI]
CDS location
range 1611 -> 3998
strand +
CDS
ATGGGTCTCATTTCGCAATCCGTCAAGAACCTGAAAGGCGGTATCAGTCAACAGCCAGACATCTTACGGTTCCCTGAACAGGGCGCTGAACAGGTTAATGGCTGGTCATCTGAGACTGAGGGTTTACAGAAGCGCCCACCTACAGTGTTCACAAAGACACTTGGTGGCGTTAACCACTTGTCCTACGAAGGAAGGAAGCCACTTATCCACCTTATCAACCGTGATGAGAATGAGCGCTACTATGTGGCGTTTCACGGTGGCGGCATTAAGGTTCACACTCTGGAAGGCCGTGAGATTCCAGTAGGTGGCGACCAATCATATGTGGTCTGCCAGAATCCCCGTGATGACCTACGGATGGTCACAGTGGCTGACTATACGTTCGTTGTGAACCGTAACTATGTGGTGCGCGGCAATGGTGCTATCAACTACAACCTGCGTGAAGACGGTGACGCTATCGTGAACATCCGTGGTGGTCAGTATGGTCGAACACTATCGATTGCCATCAACGGGACGAACCCACAAGCTACCGTTAAGATTGCTGATGGTAAGGAAGCTCCTGAAGTTCAACAGACGGATGCTCAGTGGCTCGTTCAGCAACTTGTAGGACAACTACGGACTAACTTGCAGGGCTGGGGAATCAACGAAGGCTCTGGGTTCATTCACATCATCGCTCCCGCAAACGACAGCATCCGCCAGATTGAAACCAAAGATGGCTACGGGAACCAGTTGATGAACGCGGTGATGCACCAATCTCAGAGTTTCGCTAAGTTGCCTGTAGAGGCACCTGCGGGCTATGTCGTCAAGATTGTTGGTGACACCTCTAAGACCAGCGATGCGTTCTACGTTCAGTACGATGCGACACGTAAGGTCTGGAAGGAAGTAGCAGGCTGGGGAATTGAGTCTGGATGGAACCCGGCGACTATGCCTCATGCCCTCGTCCGTAAGGCTGATGGTAACTTTGAGTTGATGCAGTTGGATTGGAATACTCGTACCTGCGGTGACAATGATACGAACCCATTCCCTTCCATCAAGGACTCAACGATTAACGATGTGTTCTTCTTCAGGAACCGCTTAGGCTTCTTGTCGGGCGAGAACATCATTATGTCGAAGACGTCCAAATACTTTAACCTGTTCCCATCCTCTGTGGCGAACCTGAGCGATGATGACCCGATTGATGTGGCGGTATCACACAACCGTATCTCTGTCCTGAAGTACGCGGTGCCGTTCTCAGAGGAGTTGCTCCTGTGGTCAGACCAAGCGCAGTTCGTGTTGTCTGCTTCAGGCATCCTCTCACCGAAGACTGTAGAGTTAAACTTGACGACTGAGTTTGATGTGTCAGACCGTGCGAGACCTTTCGGCATCGGTCGAGGGATTTACTTTGCGTCACCTCGTGCCAGCTATACGAGCCTTAACCGTTACTATGCGGTACAGGATGTTAGCTCCGTTAAGTCTGCTGAAGACATGAGTGCTCACGTTCCGAGCTATGTGCCGAACGGCGTGTTCTCCATTCGTGGCTCCGGCACTGAGAACTTCGTGTCAATCCTTTCGTCCTCTGCACCGAGCAAAATCTTCATCTACAAGTTCCTTTACTTGAATGAGGAAATCGCTCAACAGTCATGGTCACATTGGGACTTCGGGAAAGACGTTGAGGTACTCGCGGCTGACTCTATAGGCTCCACGATGCACATTCTCGCAAGGAACAAGTCGCATACCTATATGTGCCGCCTGAACTTTACGAAGAACTCCATCGACTTCGGGGATGAACCATACCGACTGTATGTTGACCATAAGACGAAGATTCGGATTAGCCCGTCAGCTTATGACGATGACCAGTACAGAACTCGTGTGTTCCTCACAGACCACTACGGGATGAACTTCTGGACAGGTGACGTGTACGTTGTGGCTCTCGATGGTCAGGTTCACAAGTTCTCACCTCCTGCTGGTGGTTGGCCTACCGGACACCCTGAGATTTACCTCAATGGCAATTGGGGCAACCAAGATGTGTTCGTAGGGTTCGCCATTCCGTTCCGCTATGTCTTCAGTAAGTTCCTCATTAAGAAGACTGCTGATGATGGCTCAACGGCTACCGAGGACATTGGTCGCTTGCAGCTTCGCCGCGCATGGTTGAACTACGAGGAATCTGGTGCGTTCGACATCGAAGTAAAGAACACCTCTCGACTCTTCAAGTACACAATGGCAGGTGCCCGTCTGGGTTCCAATGCGCTGCGTGTAGGTGGCCTCAACGTTGGTACAGGACAGTTCCGATTCCCTGTTGTTGGCAACGCTCAACTGAACATTGTGCGGATTATCTCTGACCACACTACGCCTCTCAACGTGATTGGTTGTGGCTGGGAAGGTAACTATCTGCGCCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fc0cc48c8406a1a423f416cc9370912f30a03c82633ce6026560dc65d299244e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3171
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_57 Kim,S.G., Jo,S.J., Lee,S.B., Kwon,J. and Park,S.C. 2021-01-07 — GenBank