Protein
View in Explore- Genbank accession
- AEV89307.1 [GenBank]
- Protein name
- phage tail component
- RBP type
-
TSP
- Protein sequence
-
MLGKLSFTFNKIRKDYVQMLVGRKRPSWAPIKRRLVRVPHRAGALFLNTETGERRIDVPLVIKAKKDMADLQKVKEDLADWLYTEQPAELIFDDELDRTYLALIDGSVDLDELVNRGKGVITFVCPMPYKLGKQNTHSFSQNGSTEVTASFVNQGNIEAPAIIEIEAQKPSTFLDVWFGEYPYNRDYFRIGYPLKTEQLPVERNQRLIWDEMATTVGWSKVSSMEDGNPIGEMKSDKYQFYCSDFGTSTGKGWHGAAVKKNIPGGPVEDFIMQAYVTCKSKKINEMGRVEIAILDENSKVLSKIAMNDLFWQAEQNFGTMVIGYDNKPGKIGLIYESGDYPNTWNQYFGRLWIARTGNVWEAYISKFLPGTERDDSERFARWTDEKNDHMEKAAQIQISIMQWQDVPPVEAMTVSDLKFWKVNLNTQNNPPYIFDTGDKIIIDTEKSLVTINGKNAINLKDIFSNFPAVIRGENRIDIMPPDVKATVRYRERYR
- Physico‐chemical
properties -
protein length: 494 AA molecular weight: 56693,96380 Da isoelectric point: 6,23822 aromaticity: 0,10931 hydropathy: -0,48887
Domains
Domains [InterPro]
G3DSA:2.40.30.200
ATT
2–132
ATT
2–132
DC_0077
STR
2–494
STR
2–494
IPR006520
Unmapped
7–130
Unmapped
7–130
IPR008841
STR
21–125
STR
21–125
1
494
Architecture
ATT 2-132 | STR 133-494
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
494
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 368 | 368 | 0,5617 |
| Central domain | 369 | 483 | 116 | 0,1454 |
| C-terminal | 484 | 494 | 10 | 0,2216 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-368
1-368
Central
369-483
369-483
C-terminal
484-494
484-494
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage phIS3501 [NCBI] |
1124578 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus thuringiensis serovar israelensis [NCBI] |
1430 | Bacillota > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus thuringiensis serovar israelensis |
| Host |
Bacillus thuringiensis serovar israelensis ATCC 35646 [NCBI] |
339854 | Bacteria > Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AEV89307.1
[NCBI]
Genbank nucleotide accession
JQ062992
[NCBI]
CDS location
range 31218 -> 32702
strand +
strand +
CDS
ATGTTGGGGAAACTCAGTTTTACTTTTAATAAGATTAGAAAAGATTATGTTCAAATGCTAGTTGGAAGAAAGCGCCCTTCATGGGCTCCGATAAAAAGAAGATTGGTAAGAGTCCCTCATCGTGCAGGGGCTCTTTTTCTTAATACCGAAACGGGTGAACGACGTATTGATGTTCCTCTTGTGATTAAAGCGAAAAAAGATATGGCTGATTTACAAAAGGTAAAAGAAGATTTGGCGGATTGGCTATATACAGAGCAACCAGCTGAACTTATTTTTGATGATGAGTTAGACAGGACTTATTTAGCATTAATTGATGGTTCTGTAGATTTGGACGAATTAGTGAATAGAGGTAAAGGGGTTATTACTTTTGTTTGTCCAATGCCATATAAATTAGGAAAACAAAATACTCATTCGTTCTCTCAAAATGGTTCTACTGAAGTCACTGCTTCTTTTGTCAATCAAGGGAATATAGAAGCACCTGCAATTATTGAAATCGAAGCACAGAAACCAAGTACATTTTTAGATGTGTGGTTTGGTGAGTATCCGTATAATCGAGATTACTTCAGAATTGGTTATCCTTTGAAAACAGAGCAATTACCCGTAGAAAGAAATCAAAGACTTATATGGGACGAAATGGCTACCACTGTAGGGTGGAGTAAAGTCAGTTCAATGGAAGATGGCAATCCGATTGGTGAAATGAAGTCAGATAAATATCAATTTTATTGTTCTGATTTTGGTACTAGTACGGGGAAAGGGTGGCACGGTGCGGCTGTTAAAAAGAATATCCCTGGGGGTCCAGTAGAAGATTTTATTATGCAAGCCTATGTTACATGTAAGAGTAAAAAAATTAATGAAATGGGCCGTGTTGAGATAGCGATACTTGATGAAAATAGCAAGGTTCTTTCCAAAATCGCTATGAATGATCTTTTTTGGCAAGCAGAGCAAAATTTCGGAACAATGGTAATTGGATATGATAATAAGCCAGGTAAAATAGGTTTGATTTATGAGAGTGGTGATTATCCGAATACATGGAATCAGTATTTTGGACGATTGTGGATAGCTAGAACGGGAAATGTGTGGGAGGCTTATATTTCGAAATTCCTTCCCGGGACGGAAAGAGATGATTCAGAACGATTTGCAAGGTGGACGGATGAAAAAAACGATCATATGGAAAAAGCAGCACAAATTCAGATTAGTATTATGCAATGGCAAGATGTACCACCAGTAGAAGCAATGACCGTTTCAGATTTAAAATTCTGGAAAGTGAATTTAAATACTCAAAATAATCCGCCTTACATTTTTGACACGGGAGACAAGATTATTATTGATACAGAAAAAAGTCTTGTAACCATTAACGGTAAAAATGCAATTAATTTAAAAGACATTTTTAGTAATTTTCCAGCTGTAATACGTGGGGAGAATCGTATTGATATCATGCCACCAGATGTGAAAGCAACTGTTCGTTATAGGGAGAGATACAGATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
e8185e78d8876eae658e385106b0838df3fe9bd8db32796f257bcd8e8011d49b
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Sequence Analysis of Inducible Prophage phIS3501 Integrated into the Haemolysin II Gene of Bacillus thuringiensis var israelensis ATCC35646 | Moumen,B., Nguen-The,C. and Sorokin,A. | 2012 | 22567391 | GenBank |