Protein

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Genbank accession
YP_010111012.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTKQLYEKTSEGMKEVSPLVSIEDIYSKLSDTPLEALVSLFNHVKCEWKGSVADTRRTVPLFLRRSGLFITYNNGTKYITEFFSAGADQITTEGWVKDSNWTSVPDEDYISAGVKPGVETIGYEQLNDNLKQLFREKVNATNFPDDEDIASVDNMLKLKDREADATKFQSKGYVILRKNLRLVNGVVKNILTQDMINQPNTIYEIRYDFDLNGETIEMQGKCTLKFEGGSFRNGTIKFNNTLLIGCIKLNCNFIGTIKNDYITAHQLGAKGDGITDDTNVFNCFENYIYSTYKENNNNHIGSVLKLILEPGIYLVDNIKLQSGEQIIGTSIYNTTIKTKNKVTKGVINILHPKSVISNFTIDGGSDEGFNNIGLYAYGNTGQYSVAENIKFINCTNHSAVIEDTNMFTFSGCHFNSGENGYLLLDGADCCTVNRCNFETDKDFYSPYAVKVQTKITNNTTANNTIIKECWFESNFENTFETSIEIDAFNVSILNNHFHTSSTSRKKYVINVLNKSDNILIAGNNIQNLGTIDNIRELVLNVEESAYTVFAFNNRGLYSNNNCNIRNMYTTILLMDGSIYFNNKIFTNDKELNIITSSNKNNNYLSPIHINDCYLWQDMNNVFRISNKKPANNYDGMPIGSFVKFGDSTQFPVLTNTQKGCVYASYDSPLCFWDGDNWLRGGDGYPKDTKLKGDNNNKPTDIRSGYRYYNEQFKMLEVYDGNNWKTTDGYTLPIIGYTANRPVNAIIGQPFFDRSLNKPIWWTGEKWVDATGADV
Physico‐chemical
properties
protein length:775 AA
molecular weight: 87648,20430 Da
isoelectric point:5,35153
aromaticity:0,11484
hydropathy:-0,44594

Domains

Domains [InterPro]
DC_0777
STR
1–757
DC_0777
Coil
Unmapped
124–144
Coil IPR011050
IPR012334
STR
266–660
IPR012334
YP_010111012.1
1 775
Architecture
STR
STR 1-757 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010111012.1
1 775
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,9951
Central domain 220 646 428 0,8951
C-terminal 647 775 128 0,9125
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-646
C-terminal
647-775

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr8_1
[NCBI] 		2772068 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010111012.1 [NCBI]
Genbank nucleotide accession
NC_055877 [NCBI]
CDS location
range 38986 -> 41313
strand -
CDS
ATGAGTACAAAACAACTTTATGAAAAAACTTCTGAAGGAATGAAAGAAGTTAGTCCTCTTGTTTCTATAGAGGATATTTATTCTAAACTTAGTGATACTCCGCTTGAAGCTCTTGTATCCCTTTTTAATCACGTAAAATGTGAGTGGAAAGGAAGTGTTGCTGATACTCGTAGAACTGTTCCATTGTTCTTACGTAGAAGCGGTTTATTTATTACTTATAATAATGGAACAAAATATATTACAGAGTTCTTTAGTGCTGGAGCTGACCAAATTACTACAGAAGGTTGGGTAAAAGATTCTAATTGGACTTCTGTTCCTGATGAAGATTATATTTCTGCTGGAGTTAAACCAGGAGTTGAAACTATAGGATATGAACAACTTAATGACAATTTAAAGCAGTTATTTAGAGAGAAAGTTAATGCGACTAATTTTCCAGATGATGAAGATATTGCTTCTGTTGATAACATGCTTAAACTTAAAGACAGAGAAGCTGATGCTACAAAATTTCAATCTAAAGGTTATGTAATTCTTAGAAAAAATTTACGTTTAGTTAATGGTGTAGTTAAGAATATTCTTACTCAAGATATGATTAATCAACCTAATACTATCTATGAAATTAGATATGATTTTGACTTGAATGGTGAGACTATTGAAATGCAGGGTAAATGTACCTTGAAGTTTGAAGGTGGTAGTTTTAGAAATGGTACAATTAAATTTAATAATACTTTATTAATTGGATGTATTAAACTTAATTGCAATTTTATTGGAACTATAAAAAATGATTATATTACTGCACATCAATTAGGTGCTAAAGGTGATGGTATTACGGATGATACAAATGTGTTTAATTGTTTTGAAAACTATATATATTCGACTTATAAAGAAAATAATAATAATCATATTGGTAGTGTTCTTAAGTTAATACTCGAACCTGGTATTTATTTAGTAGATAATATTAAATTACAAAGCGGAGAACAAATAATAGGAACATCTATATATAATACAACAATAAAAACTAAAAATAAAGTAACAAAAGGTGTTATTAATATATTACATCCGAAAAGTGTAATAAGTAATTTTACTATTGACGGGGGTAGTGATGAAGGATTTAATAATATAGGGCTATATGCTTATGGTAATACTGGACAATATTCAGTTGCAGAAAACATTAAATTTATAAATTGTACAAATCATAGTGCAGTAATTGAAGATACCAATATGTTTACTTTTTCTGGTTGTCATTTTAATTCAGGAGAAAACGGATATTTATTATTAGATGGTGCTGATTGTTGTACAGTAAATAGATGCAATTTTGAAACTGATAAAGATTTTTATAGTCCGTATGCTGTAAAAGTTCAAACGAAAATAACAAATAATACAACAGCTAACAATACTATAATAAAAGAATGTTGGTTTGAATCAAATTTTGAAAATACTTTTGAAACTTCTATAGAAATAGATGCTTTTAACGTATCTATACTTAATAATCATTTTCATACATCATCTACGAGTAGAAAAAAATACGTAATTAATGTTTTAAATAAATCAGATAATATTTTAATTGCAGGAAATAATATTCAAAATTTAGGTACTATAGATAACATTAGAGAACTTGTATTAAATGTAGAAGAATCAGCATATACAGTATTTGCATTTAATAATAGAGGACTATATAGCAATAATAATTGTAATATACGAAATATGTATACTACAATTTTATTAATGGATGGTAGTATTTACTTTAATAATAAGATATTTACTAATGATAAAGAATTAAATATTATTACTAGTAGTAATAAGAATAACAATTATTTATCACCAATACATATAAACGATTGTTATTTGTGGCAAGATATGAATAATGTCTTTAGAATTTCCAACAAAAAGCCAGCAAATAATTATGATGGTATGCCTATAGGTAGTTTTGTTAAGTTTGGAGATTCTACGCAGTTTCCAGTATTAACTAACACACAAAAAGGATGTGTTTATGCTTCTTATGATAGTCCTTTATGTTTTTGGGATGGTGATAATTGGTTACGAGGAGGAGATGGTTATCCAAAAGATACTAAATTAAAAGGCGATAATAATAATAAACCAACAGATATAAGAAGTGGTTATAGATATTATAATGAACAATTTAAAATGTTAGAAGTATATGATGGAAATAACTGGAAAACAACAGATGGATATACTTTACCTATAATTGGTTATACAGCAAATAGACCAGTCAATGCAATTATAGGTCAACCGTTTTTCGATAGAAGTTTGAATAAACCTATTTGGTGGACTGGAGAAAAATGGGTAGATGCAACTGGAGCAGATGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cfc5bf905acae01117b0f5596dd7ed5176ee6b83c94da81b9d8e61becf6edc6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3092
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank