Protein

View in Explore
Genbank accession
YP_009784962.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MISNNAPAKMVLNSIMTGYTLAYVQHSIYTDYDVIGRSFWLKVEESIDRRDYTGVDTFFVMINNLTPSTSYEIQGAFYDSIIDSELLEAKIGINLSNETNFRTKEKPIIVAARSESEPVDVGVGAPIVVVETTGEASYCTIELKSTASEDSEWVKYYIGALGPTIKFGGVPVGDYKIRISGQVTMPDGVTVDSSGYYEYPSVFTVAYNFVPPTAPTNIAFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYARTGWAKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNRQDITESAPATFILNEDTPLDNSFVNETGIDVNYAFIKGSMKEGEIWKQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGEDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGDVLRISSGVVIGTPNGDVDLGTGMQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNRLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSVGIAGLSGWDDGQANSFFQSNFGSPPVKYDVLTEFNSNSPQTAFTRQWNGSGWVNPAMVLHGNMIVNGTITADKIVAGNAFLSQIGVNTIYDRAAALSGNPEAQYKMKIDLVNGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74868,96380 Da
isoelectric point:4,76910
aromaticity:0,10365
hydropathy:-0,24015

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
YP_009784962.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009784962.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 407 407 0,8560
Central domain 408 606 200 0,2966
C-terminal 607 685 78 0,4096
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-407
Central
408-606
C-terminal
607-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage DT571/2
[NCBI] 		1567007 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus DT5712
Host Escherichia coli HS
[NCBI] 		331112 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009784962.1 [NCBI]
Genbank nucleotide accession
NC_047749 [NCBI]
CDS location
range 76201 -> 78258
strand -
CDS
ATGATTTCAAATAATGCACCAGCCAAAATGGTCTTAAATAGTATAATGACTGGATATACTTTGGCTTATGTCCAGCACTCCATTTATACTGATTATGATGTTATTGGTAGATCTTTTTGGTTAAAAGTAGAAGAAAGTATAGATAGACGTGATTACACCGGTGTAGATACTTTCTTCGTAATGATTAATAATCTAACCCCCTCTACCTCCTATGAGATTCAGGGGGCTTTCTATGACTCAATTATTGACTCAGAGTTACTGGAAGCTAAGATTGGTATCAACCTCTCTAATGAAACTAACTTTAGAACAAAGGAAAAGCCAATAATTGTTGCAGCAAGATCTGAATCAGAACCCGTTGACGTTGGTGTTGGTGCTCCCATAGTTGTTGTAGAGACAACTGGTGAAGCTAGTTACTGCACTATTGAATTAAAAAGTACTGCATCAGAAGATAGTGAATGGGTTAAATATTATATAGGCGCACTGGGACCTACTATCAAATTTGGTGGTGTTCCTGTTGGTGACTATAAGATCAGAATATCTGGCCAAGTTACGATGCCAGATGGTGTTACAGTTGACTCATCTGGTTATTATGAATATCCTAGCGTTTTCACTGTAGCTTATAATTTCGTACCGCCTACTGCACCTACTAACATTGCCTTTAAAGCTGCACGAATTGCAGATGGTAAGGAACGTTATGATGTTAGAATAGAATGGGACTGGGAACGTGGGGCGGGTGCTAACGTCCGTGAATTTCTGGTTACTTATATAAACTCTGAAGAATATGCTAGGACTGGTTGGGCTAAAGCTCAAAAGATAAACGTTGGGGCTGCTAGGGCTGCAACGATTATATCATTCCCATGGAAAGTTGAGCATACTTTTAAGGTATCATCAATTGCCTGGGGACCAAATAGGCAAGATATAACAGAATCAGCTCCTGCAACATTTATATTGAATGAAGATACTCCTCTAGACAACAGTTTTGTCAATGAGACGGGTATTGATGTTAATTATGCCTTTATTAAGGGCAGCATGAAAGAGGGAGAAATCTGGAAACAGACATTCTTAATCGACGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGATGAAGAAGGAAAAGCACCCATTTCTTTTGACCCTATAAACCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAACTTTATCATGACTAACTTATCTGGTGAGGATAATCCGGCAATTTACACTCAGGGTAAATCTTGGGGGGATAATAACTCAGGTATTTGGATGGGTATGGATAATACCTCTGCCAAAGCTAAATTAGACATTGGTAATGCCACACAGTGGATTCGTTATGATGGTGATGTGCTACGTATTTCTAGTGGAGTAGTTATTGGAACTCCTAATGGCGATGTAGATCTGGGTACTGGTATGCAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTCTACCTGCTAAACCACTAGAGCAGGATTATCCGCCTCCGGGTTGGTCAAAAACTCCACCTAACCGCACAGATATGACACAAAATATCTATGCGACTACGGGTACACTTGATCCAGTTACTAATAGGTTATTAGAGGGTACTAGTTGGTCGGATGTAGTTCAGTGGAGCGGTACTGAAGGTACTATAGGGCATGATGGACAACGTGGTCCTGGGATGTATTCTGTAGGTATAGCAGGTTTAAGTGGTTGGGACGATGGACAAGCTAATTCTTTCTTTCAAAGTAACTTCGGTTCTCCCCCAGTTAAATATGATGTATTAACTGAATTTAATAGTAATTCACCTCAAACTGCATTTACTAGACAATGGAACGGTTCTGGTTGGGTTAACCCAGCTATGGTACTTCATGGTAATATGATAGTTAATGGTACTATTACAGCGGATAAAATAGTAGCTGGGAATGCTTTTCTATCACAAATAGGTGTTAATACTATATATGATAGGGCTGCCGCACTATCAGGAAATCCTGAAGCTCAATATAAGATGAAAATAGATCTAGTAAACGGATATATTCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a08bf95705e0a14b57977f91483681db35f18cb155711e0ac860b08fd9908ec7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50