Protein
View in Explore- Genbank accession
- UOL51126.1 [GenBank]
- Protein name
- tail fibers protein
- RBP type
-
TF
- Protein sequence
-
MQHLKNLKKYIPDDEDSLFLIKEHNVEFYISEDGRDWYKSQADFSPDTLKIAYDETGIIRSISKDVSSIYPRDFSIVEVDITEENKNVDIFGGWVFDNGEIKPRQYSQEELRAQAEAKKTELLSAAAVAIAPLQDAVDEGMATEEETAALSEWKKYRVKVMRIDTSKPEWPLLPDIKAS
- Physico‐chemical
properties -
protein length: 179 AA molecular weight: 20507,74600 Da isoelectric point: 4,63502 aromaticity: 0,09497 hydropathy: -0,58212
Domains
Domains [InterPro]
DC_1477
STR
1–179
STR
1–179
IPR003458
RBD
41–174
RBD
41–174
IPR051220
Unmapped
74–176
Unmapped
74–176
1
179
Architecture
STR 1-179
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Citrobacter phage Chris1 [NCBI] |
2930390 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Citrobacter portucalensis [NCBI] |
1639133 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UOL51126.1
[NCBI]
Genbank nucleotide accession
ON041214.1
[NCBI]
CDS location
range 28454 -> 28993
strand -
strand -
CDS
ATGCAGCATCTTAAAAACCTTAAAAAATACATACCAGATGATGAAGATAGCCTGTTTCTTATCAAGGAACATAATGTTGAGTTTTACATTTCAGAAGATGGAAGGGATTGGTATAAATCCCAGGCTGATTTCTCACCTGATACGTTGAAAATTGCTTATGATGAAACAGGTATTATTCGCAGTATTAGTAAGGATGTTTCAAGCATTTACCCGCGTGATTTTAGCATCGTTGAAGTTGATATTACAGAAGAGAACAAGAATGTAGATATTTTTGGTGGGTGGGTATTCGACAACGGAGAAATTAAGCCACGCCAATATTCGCAAGAGGAATTACGCGCACAGGCTGAAGCGAAGAAGACCGAGCTATTGTCTGCCGCTGCTGTCGCTATTGCGCCACTGCAAGATGCTGTCGATGAAGGAATGGCGACGGAAGAAGAAACCGCCGCACTGTCAGAATGGAAAAAATACAGGGTGAAGGTTATGCGTATTGATACGTCAAAACCTGAGTGGCCTCTGCTCCCGGATATTAAGGCCAGTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
fe9a3268f550438f9ff397385ee056531a4318d3243769db2bda3c805c23140a
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| The genomic sequence of phage isolated from Citrobacter | Yu,Y. | 2016-02-08 | — | GenBank |