Protein

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Genbank accession
QNJ54117.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MKVLGNLPIIKDVNSVYPFGAAIKNQTETEQGTPAIREIYNDVLMNIYKILQLTGVNPSNKEDNNYNGYQIIEALKKLPNSLNDIEQILTLDGTVWTVPFDLQYLPNKYMFVARASENYNPAITYTFKGLGVTELPFNPINGFSATDELLVIIDTSGVRSYSLNKPTEASSIVYTGMGQVVTFNDLNTVYYYNNYYGSGWLFTDTPNSCDILNIVRLFASKGTLEIKDIFIHNNTIVCFCFDPSDLAYFIYDVDLTKLTVSFNIELSNDADSYYDPVAYMDENGDLWMTNRGNLNGGVNDNEVYKFVRNGLGIFTFNSTITLGVSFVKTRNAAIKHGFLYTYFGLYLNKYNLTTGALTSSVYLPAVGQLMQLNGEVYFNSGYIAKRFDL
Physico‐chemical
properties
protein length:389 AA
molecular weight: 43760,96260 Da
isoelectric point:4,67372
aromaticity:0,13882
hydropathy:-0,07429

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNJ54117.1
1 389
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,9748
Central domain 119 317 200 0,4455
C-terminal 318 389 71 0,8940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-317
C-terminal
318-389

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage V186
[NCBI] 		2565711 No lineage information
Host Flavobacterium columnare
[NCBI] 		996 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNJ54117.1 [NCBI]
Genbank nucleotide accession
MT585313 [NCBI]
CDS location
range 24165 -> 25334
strand +
CDS
ATGAAAGTGTTAGGAAATTTACCAATAATAAAAGATGTTAATTCTGTTTATCCTTTTGGAGCAGCTATAAAAAATCAAACTGAAACTGAACAAGGTACTCCAGCAATTAGAGAAATTTACAATGATGTTTTAATGAACATTTATAAAATTTTACAGTTAACTGGCGTAAATCCATCTAATAAAGAAGATAACAATTATAATGGTTATCAAATAATTGAAGCTTTAAAGAAGTTGCCAAATAGTTTAAATGATATTGAACAAATATTGACGTTAGACGGTACAGTTTGGACAGTACCGTTTGATTTACAATATTTACCAAACAAATATATGTTTGTTGCTAGGGCATCAGAAAATTATAACCCTGCTATAACCTACACCTTTAAAGGTTTAGGAGTTACTGAACTTCCTTTTAATCCTATAAATGGTTTTAGTGCTACAGATGAATTGTTAGTTATTATTGACACGTCAGGAGTAAGAAGTTATTCTTTGAATAAACCAACAGAAGCATCAAGTATAGTTTATACTGGCATGGGGCAAGTAGTTACGTTTAACGATTTGAATACTGTTTATTATTACAATAATTATTACGGTAGTGGTTGGTTGTTTACCGATACGCCTAATTCATGCGATATTTTAAATATAGTTAGGTTATTTGCATCAAAAGGTACGTTGGAAATAAAAGACATTTTTATACACAACAATACTATTGTTTGTTTTTGTTTTGATCCATCAGATTTAGCTTATTTTATTTATGATGTGGATTTGACTAAATTAACAGTTTCATTTAATATTGAGTTGTCAAATGATGCGGATAGTTATTATGACCCAGTCGCTTACATGGATGAAAACGGTGATTTATGGATGACAAATAGAGGAAATTTAAACGGTGGGGTAAACGATAATGAAGTATATAAGTTTGTTCGTAATGGTTTGGGTATTTTCACCTTTAATTCTACTATTACTTTAGGTGTTTCTTTTGTAAAAACTAGAAATGCAGCAATAAAGCATGGTTTCTTGTATACTTACTTTGGATTGTACTTAAATAAGTATAATTTAACTACTGGAGCATTAACCTCAAGTGTGTATTTGCCTGCTGTTGGTCAGTTAATGCAATTAAACGGGGAAGTTTACTTTAATTCAGGGTATATAGCCAAAAGATTTGATTTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
819e6076767027df90b1a1dbc9fde256c2adb23dac83f9f29fb3535d2512770b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6197
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Repeated isolation of genetically similar Flavobacterium columnare phages with a strong potential for pathogen control Runtuvuori-Salmela,A., Kunttu,H.M.T., Laanto,E., Almeida,G.M.F., Makela,K., Middelboe,M. and Sundberg,L.-R. 2020-09-23 — GenBank