Protein

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Genbank accession
AZF88303.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVYRFTQADIDAAAAQGVTMKLSGLDVSDFDGFSDSDTLVATASGGRKFTVIPASGFDPAYTSIYFFGWNPSEGENMNISFVLSNNDTVATLKPAVGMNFTKFFVTTQAAAVALAWVNHPSSGSENTDIVFSWDGGTLTTGNYNVVVTKDGAEVVNISTPDKSYTLNKTAGDYVVTVYDKGGKSDSTASNISQAITLSAVLPKALYTVKAADITAISDNEIDMKVNGADITAGSVLRLGDVIVAKVSGIRKFYTDTTLHGTSINFAVFFDGESQWLQFALSDNDQTATFTMVDDTSGSAGTYQAWNIRTKQETPAVVGTNNVYKIDTSILSSVNKERFVTITGSDTPFDYGQYILSVLQFPFDIPADQILTPENIQLANRQLSVAANKVATDKIKIDLGEIVVPDTYGNMLSFANTNAVIHLPLAPSIVLDLEYVIGQTLGVYYLLDCYTGTATINITSTKLAAVISSTQVNIGVRVPYMADSYTAPENTGVVAGGNNGVKIPYIELISHDAILPHGFFTVPVVDETLISGQTGYIKVDNVELVTGALGNEKAQIISLLNSGVIIK
Physico‐chemical
properties
protein length:568 AA
molecular weight: 60569,35420 Da
isoelectric point:4,47223
aromaticity:0,09155
hydropathy:0,11461

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Astrid
[NCBI] 		2483851 No lineage information
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF88303.1 [NCBI]
Genbank nucleotide accession
MK080312.1 [NCBI]
CDS location
range 8006 -> 9712
strand +
CDS
ATGGCTAACGTTTATCGTTTTACTCAGGCTGATATTGACGCCGCCGCCGCTCAGGGTGTAACAATGAAATTGAGCGGTTTAGATGTTTCCGATTTTGACGGGTTTTCTGATAGTGACACGTTAGTAGCAACGGCATCAGGTGGACGTAAATTTACCGTAATTCCTGCCAGCGGTTTCGACCCTGCCTATACCAGTATTTATTTCTTTGGTTGGAATCCGTCAGAAGGTGAAAACATGAATATCTCATTCGTGCTTTCAAATAATGACACCGTGGCAACCCTTAAACCAGCGGTGGGGATGAATTTCACTAAATTCTTTGTTACCACTCAGGCGGCTGCCGTTGCTTTAGCGTGGGTTAATCATCCTTCCAGCGGTTCGGAAAATACGGATATTGTTTTTTCGTGGGATGGCGGAACGTTAACAACCGGTAATTATAACGTTGTCGTTACTAAAGACGGCGCGGAGGTTGTTAATATTTCAACGCCTGATAAATCATACACTCTAAATAAAACCGCTGGCGATTATGTTGTAACGGTTTACGATAAGGGAGGTAAAAGCGATTCTACCGCGTCCAATATCAGCCAGGCTATCACGTTGTCAGCCGTACTACCTAAAGCACTATACACCGTTAAAGCCGCCGATATTACCGCCATTTCAGATAATGAAATTGATATGAAGGTTAACGGCGCTGATATTACGGCGGGTAGTGTTTTGCGTTTGGGTGATGTTATTGTAGCAAAAGTTTCAGGCATCAGAAAATTCTACACTGACACCACGTTACACGGAACAAGTATTAATTTTGCGGTTTTCTTTGACGGGGAATCCCAATGGCTGCAATTTGCGCTATCAGATAATGACCAGACCGCAACGTTTACTATGGTTGACGATACCAGCGGAAGCGCGGGAACTTATCAGGCGTGGAATATTCGCACGAAACAAGAAACGCCAGCCGTAGTCGGTACAAATAACGTTTATAAAATTGATACTTCCATTTTATCAAGTGTTAATAAAGAACGTTTTGTTACTATTACCGGAAGTGATACCCCGTTTGATTATGGTCAATATATTCTCAGCGTTTTGCAATTCCCTTTTGATATTCCGGCTGACCAGATTTTAACGCCTGAAAATATTCAGCTTGCAAACCGTCAGTTATCCGTTGCAGCTAATAAGGTTGCGACTGATAAAATTAAAATTGATTTAGGGGAAATTGTTGTACCTGATACTTATGGTAATATGCTTTCCTTTGCTAATACAAACGCGGTTATTCACTTGCCTTTAGCGCCGTCTATTGTATTGGATTTGGAATATGTCATAGGGCAAACGTTAGGCGTTTATTATCTGCTGGACTGTTACACCGGAACGGCAACAATTAATATCACCTCCACTAAATTAGCCGCCGTTATTTCATCGACTCAGGTTAATATTGGTGTTCGGGTTCCCTATATGGCTGACTCTTACACCGCGCCGGAAAATACTGGCGTAGTGGCTGGCGGTAATAACGGGGTTAAAATTCCGTATATCGAACTGATTAGCCATGATGCAATATTGCCTCATGGATTCTTTACGGTTCCGGTAGTAGATGAAACATTAATTAGCGGTCAAACTGGCTATATTAAGGTTGATAATGTAGAATTGGTAACTGGCGCTTTAGGTAATGAGAAAGCGCAGATTATTTCTTTACTAAATAGTGGGGTTATTATCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
556a0155b40bcaf0bdd1f347a05dbd219aec1e7e9f8b0715ea027e6ee139a444
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8457
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank