Protein

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Genbank accession
UDY80360.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MATEPRVLGGIGLNGFWPQGADGWKDGVDANWLKLSALTQLVLDAHPTIVLPTSPADGYIAIDPSDKKVAVRDNGAWVKYTPKLGWSAAYQEKRFRYDGAGWQEAANPNYDDYNSMVSLINSIRTSAFGIGQSNQNVGAGRGPNTNFTNNTGRPILAAVASLTTGANGRIILYIDDALAGNDFNPTSGATVLCQIVIPAGSTYRAVPVNGNISSWWEFRNNP
Physico‐chemical
properties
protein length:222 AA
molecular weight: 23774,22890 Da
isoelectric point:5,77719
aromaticity:0,09910
hydropathy:-0,25541

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage AXY1
[NCBI] 		2884451 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UDY80360.1 [NCBI]
Genbank nucleotide accession
OK041469.1 [NCBI]
CDS location
range 22924 -> 23592
strand -
CDS
ATGGCAACTGAACCCCGCGTACTAGGCGGCATCGGTCTGAACGGCTTCTGGCCGCAAGGTGCTGACGGCTGGAAGGATGGCGTCGATGCCAACTGGCTCAAGCTGTCGGCGCTCACGCAGCTTGTTCTCGACGCGCACCCCACTATCGTGCTGCCCACCAGCCCAGCAGACGGCTACATCGCCATCGACCCTTCGGACAAAAAGGTCGCGGTGCGCGACAACGGAGCATGGGTGAAGTACACACCGAAACTCGGTTGGAGTGCGGCATACCAGGAGAAGCGATTCCGCTACGACGGTGCAGGTTGGCAGGAAGCAGCCAACCCGAACTACGACGACTACAACTCGATGGTGTCGCTGATCAACAGCATCCGTACCAGCGCATTCGGCATTGGCCAGAGCAACCAGAACGTCGGCGCTGGTCGTGGGCCGAACACGAACTTCACCAACAACACGGGGCGACCCATTCTCGCGGCCGTGGCATCGCTGACGACTGGGGCCAACGGCCGCATCATCCTGTACATCGACGACGCGCTGGCGGGCAACGACTTCAACCCTACTAGCGGCGCGACGGTCTTGTGCCAGATCGTTATCCCTGCCGGGTCAACCTACCGCGCTGTGCCTGTGAACGGCAACATCAGCAGCTGGTGGGAATTCCGCAATAACCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
177ed98c72e517ea0a9e8e6470eca320e769891925fc19867c0a8ff7ec7abb9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8977
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and formulation of novel lytic bacteriophages for use against Pneumonia causing bacteria Ku,H. 2020-10-08 — GenBank