Protein
View in Explore- Genbank accession
- QPX71658.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MSGKITQHELSQELLDYIAEQVQGPEDLRTAIYTQVFTATEGQTQFIIDGKYVPNTKTIFVFVSGVKQISREGFSETSENSINLAEGVPAGTKVEITWLGNATPISGAHAITHEIGGSDEIDIKKLLGYSDVDKRISDIEETYPNRMNALEVTLSEQMTELQKDTETRVSEVETNTTQRMDTMQANMTTAMDNTFKKITTSADQKEYNVKDYGAKGDGVTDDAPAIQKVLDMALTLGGIKIRIPSGTYALKSILYVYSNTEIEMSKDTVLLRAANTNSMFYNANPSSSTTATLYNGHGNITIKGGTFDANIANFSTVNNTICGINHCKNLRFEGVTFKNIRDNHAMDINATDGLVVKDCKFLGFRLTNQSRNYVEAIQLDVCTPGSFPAFGAYDRTETKNVLIEGCYFGPSDTEGSWPTAIGNHGAVHDRWNHNIIIKNNVFDGCTYSGVRAYKWSHVLVEGNVFDNCNRPFAYVIPTPNTASTEDADGVQSGVTQGGVDIKIINNTIVNGNDHGIYVSAYRDSNTSVIVTNKRVIIQGNSIYNTPVGYNSIDVMHSEDVVVEGNICEGSRRLLYSLYCTRMTITGNTAHNAINHTYLSSCTGATITGNTGQNHNQHGFRIESCNSVNVNGNTLLDCSTDSSKMYHGVYVVSSSRYVMVANNVITESNPLMLSAVNITADSVNCEQSNNLTNVTSS
- Physico‐chemical
properties -
protein length: 696 AA molecular weight: 76079,82290 Da isoelectric point: 5,18101 aromaticity: 0,07471 hydropathy: -0,32328
Domains
Domains [InterPro]
IPR011050
STR
199–472
STR
199–472
IPR012334
STR
205–554
STR
205–554
IPR012334
STR
207–554
STR
207–554
IPR024535
ENZ
208–469
ENZ
208–469
IPR006626
Unmapped
327–358
Unmapped
327–358
DC_0135
STR
536–690
STR
536–690
1
696
Architecture
STR 199-690 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
696
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 220 | 220 | 0,9837 |
| Central domain | 221 | 685 | 466 | 0,9979 |
| C-terminal | 686 | 696 | 10 | 0,1623 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-220
1-220
Central
221-685
221-685
C-terminal
686-696
686-696
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage SP8 [NCBI] |
2770327 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus subtilis [NCBI] |
1423 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QPX71658.1
[NCBI]
Genbank nucleotide accession
MW001214.1
[NCBI]
CDS location
range 75211 -> 77301
strand +
strand +
CDS
ATGTCTGGCAAAATTACTCAACATGAGTTGTCCCAAGAGCTATTAGATTATATAGCAGAACAGGTGCAAGGTCCCGAAGACCTCAGAACCGCTATATACACGCAAGTGTTTACAGCTACGGAAGGACAAACTCAGTTTATCATAGATGGTAAATATGTTCCTAACACTAAGACTATATTTGTATTTGTCTCTGGTGTTAAGCAAATTTCTAGAGAAGGGTTTAGCGAAACCAGTGAGAATAGTATAAATTTGGCTGAGGGCGTGCCCGCTGGCACCAAAGTAGAGATTACATGGTTAGGAAATGCTACCCCTATTAGTGGTGCCCACGCCATAACTCATGAGATTGGTGGATCAGACGAGATAGACATCAAGAAGCTACTGGGTTACAGTGATGTGGACAAAAGAATTTCTGATATTGAAGAAACATATCCTAATCGCATGAATGCTCTTGAAGTGACTCTGTCAGAACAGATGACAGAGTTGCAGAAGGATACAGAAACTAGGGTGTCTGAAGTAGAAACTAACACCACCCAAAGAATGGACACCATGCAAGCCAACATGACTACAGCTATGGATAATACCTTCAAGAAGATTACGACTTCAGCAGATCAGAAAGAGTACAATGTCAAAGATTATGGAGCCAAGGGTGATGGAGTAACAGATGATGCTCCAGCCATCCAAAAAGTATTGGACATGGCTCTTACCCTTGGAGGTATTAAAATACGTATCCCTTCAGGCACCTATGCCCTAAAGAGCATACTGTATGTGTATTCTAATACTGAAATTGAGATGTCAAAAGACACTGTGTTATTAAGGGCGGCAAATACTAACTCTATGTTCTATAATGCCAATCCGTCATCCTCCACCACCGCTACACTATACAATGGTCATGGTAACATAACCATCAAGGGTGGAACATTTGATGCCAATATAGCTAATTTTTCTACTGTAAACAACACCATCTGCGGGATCAACCATTGTAAAAATCTACGGTTTGAAGGTGTCACATTTAAGAACATCAGGGACAACCATGCTATGGACATAAATGCCACTGACGGATTGGTTGTTAAGGACTGTAAGTTCTTAGGGTTTCGCTTAACAAACCAAAGCCGTAACTATGTTGAAGCAATCCAGTTAGACGTATGTACTCCCGGATCGTTTCCTGCCTTTGGAGCATATGATAGAACTGAAACTAAAAACGTTCTCATTGAGGGATGTTACTTTGGTCCCAGTGATACGGAGGGTAGCTGGCCCACAGCAATAGGAAATCATGGTGCTGTTCACGATAGGTGGAATCATAACATTATTATAAAGAATAATGTGTTTGATGGCTGTACTTACTCAGGTGTAAGGGCTTACAAATGGTCTCACGTGCTAGTTGAAGGAAATGTATTTGATAATTGCAATAGACCGTTTGCGTATGTTATTCCTACCCCAAACACCGCCAGTACTGAGGATGCTGATGGCGTGCAATCTGGGGTCACTCAAGGCGGAGTGGATATTAAGATTATCAATAACACAATAGTGAATGGTAATGATCATGGAATTTATGTCTCTGCATACAGAGATTCCAATACCTCCGTTATCGTCACTAATAAACGAGTAATAATACAAGGAAACTCTATATACAACACACCAGTGGGATATAACTCTATAGATGTAATGCATTCAGAAGATGTGGTGGTTGAAGGAAATATCTGTGAGGGTTCCAGAAGGTTGTTATATAGCTTATACTGTACAAGGATGACCATTACTGGCAATACCGCTCACAATGCCATCAACCATACGTACCTATCTTCCTGTACTGGTGCAACGATCACCGGAAATACTGGTCAGAATCACAACCAGCATGGATTTAGGATCGAGTCGTGCAACTCTGTAAATGTGAATGGTAATACATTACTTGACTGTTCCACGGACTCCTCTAAGATGTATCATGGGGTCTATGTAGTAAGCTCAAGCAGGTATGTGATGGTGGCAAATAATGTCATTACTGAAAGCAACCCATTAATGCTATCCGCTGTTAACATAACAGCTGACAGTGTGAATTGCGAGCAATCCAATAACTTAACTAATGTAACTTCATCTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
40c62d1201af0ec933256b2bd6667c856b856d2e39fcdcf4887317650ba699ab
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50