Protein

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Genbank accession
YP_010298994.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MSDEIVFPYDFDPYQENSSNQISSEAHTITAANGTDFNFIVPRYAPFFRRGFVCRNTTTGVTLRPDVDYFFGFRFDQIIVSGSQLPVYGAIVFNDKSLSANIEIDYHTLGGEFCLDENSILQLMANKAQDPRSLQWGAVVNLPTEFPPIAHRHDADDMTGFSEVISAIYSLSDSQTAGFNKAMQSLLEHIADHNNPHHITLADLGIDDLGNLVPASKEQAEGGTDNTYYMTSLRTSQQFQAIFQPMLQEHEDDQSNPHGVTKAQVGLDLVPNYRTANSLESSAGVADNLLLTPSGGRILANALVPGIMEFHTANTNNPHGVTKTQVGLGNVPNYATATEEEALAGVSKTTLLTPYLANLMLTNSTDQPLAAHLLDYNNPHQVTATQVGLGNVSNYGTATNDQTLLGTATNLFTTPAGIAYWWTNSAKMYVDQAIEQGTNLTAVDVGLGNVVNAGFATTAENQAGTATQTYVDPAGVTTALTSNVLVRNYSCQPSYIAKLISGFPAGGLVASSTRSSTGVNKEWSSTLRTVTSPLHSASQVSALITPAPASYSQRAYVDVATGTSIPGFIFGYYQDSNGNENYAGIFFKNGAVYLGTYIAGVWTTGSDVALAALTGASVQVTCTLSGTTMSVTVASTTVTVNVSSVTFTPTTFASMAGFIVNGKDALVFTPTSFGGLTYSIVDVISHQSYKYSASAWAVDTVVDLSGLPAELRVGRLICNLGSGESFVPVSSSGFAVINPPTAV
Physico‐chemical
properties
protein length:743 AA
molecular weight: 78916,81640 Da
isoelectric point:4,68799
aromaticity:0,09152
hydropathy:-0,01763

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010298994.1
1 743
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,9514
Central domain 506 705 201 0,4578
C-terminal 706 743 37 0,5585
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-705
C-terminal
706-743

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpM_FBKp24
[NCBI] 		2801834 Uroviricota > Caudoviricetes > Chimalliviridae > Maaswegvirus Kp24 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010298994.1 [NCBI]
Genbank nucleotide accession
NC_061421 [NCBI]
CDS location
range 284575 -> 286806
strand -
CDS
ATGAGCGACGAAATTGTATTCCCATATGACTTCGATCCTTACCAAGAGAATAGCAGTAATCAGATCTCAAGTGAGGCTCATACGATAACGGCGGCTAACGGAACGGACTTTAACTTTATTGTCCCGCGTTACGCCCCGTTCTTTCGCCGCGGTTTTGTCTGCCGCAACACGACCACTGGGGTAACTTTACGACCCGATGTGGATTATTTCTTCGGTTTTCGTTTTGACCAAATTATTGTCAGCGGGAGTCAATTACCTGTTTATGGCGCTATTGTCTTTAATGACAAATCACTCAGCGCAAATATTGAAATTGACTACCACACATTAGGCGGTGAATTCTGTCTGGATGAGAACAGTATTCTCCAGTTAATGGCAAATAAGGCTCAAGATCCTCGTTCATTGCAGTGGGGTGCTGTAGTCAATTTACCGACCGAATTCCCGCCGATCGCGCATCGTCATGACGCAGATGACATGACAGGTTTCAGCGAAGTTATCTCGGCCATCTATTCGCTGTCCGATTCGCAAACTGCCGGATTCAATAAAGCAATGCAATCCCTGCTGGAGCACATTGCCGACCACAACAACCCGCACCATATTACGCTGGCCGATTTAGGGATCGATGATCTCGGTAACTTAGTACCGGCTTCGAAAGAACAAGCAGAAGGCGGGACAGACAATACCTATTACATGACGTCTCTTCGTACCTCGCAGCAGTTCCAGGCTATTTTCCAGCCGATGCTGCAAGAACACGAAGACGACCAGTCTAACCCTCACGGCGTTACTAAAGCGCAAGTCGGGTTAGATTTAGTTCCTAACTACCGCACAGCAAACTCACTTGAATCTTCGGCAGGGGTGGCAGATAACCTCTTACTGACTCCGTCTGGCGGGCGTATTTTAGCCAACGCGTTAGTGCCGGGTATTATGGAATTCCATACCGCTAATACCAATAACCCTCACGGTGTCACAAAGACGCAGGTCGGTTTAGGGAATGTCCCTAACTATGCAACGGCGACAGAAGAAGAGGCCCTGGCAGGCGTCAGTAAAACGACGCTCTTAACGCCGTACTTAGCCAACTTGATGTTGACGAACTCGACAGACCAACCTTTAGCTGCGCACTTACTGGATTACAACAACCCGCACCAGGTCACTGCTACGCAAGTCGGTCTTGGAAACGTGAGTAACTACGGTACCGCCACCAACGATCAAACCTTGCTGGGTACCGCAACGAATCTGTTCACTACTCCGGCAGGCATCGCCTACTGGTGGACCAATTCGGCGAAAATGTACGTCGATCAGGCAATTGAACAAGGTACCAACCTAACCGCAGTGGATGTGGGTCTTGGGAATGTAGTTAATGCAGGATTTGCAACGACCGCAGAAAACCAGGCCGGAACAGCAACTCAGACTTATGTCGACCCGGCGGGGGTCACTACTGCGCTGACGAGCAATGTGTTGGTTCGCAACTACTCCTGCCAACCCTCATATATCGCCAAACTGATTTCCGGTTTTCCAGCAGGCGGGTTGGTGGCCAGTAGTACCAGGTCCTCGACGGGTGTTAATAAAGAATGGAGCTCAACCCTCCGTACCGTGACCTCCCCACTGCATAGCGCCAGTCAAGTAAGTGCGTTAATCACGCCAGCTCCAGCAAGCTACTCGCAACGCGCTTATGTCGACGTAGCCACCGGTACATCTATCCCGGGCTTTATCTTCGGTTATTACCAAGACAGCAACGGTAATGAAAATTACGCGGGGATCTTTTTTAAGAACGGTGCCGTGTATTTAGGTACTTATATTGCGGGTGTCTGGACAACGGGTAGCGACGTTGCTTTGGCCGCTCTAACAGGGGCCTCTGTTCAGGTTACTTGCACCCTTTCCGGGACCACAATGTCAGTGACCGTTGCATCAACGACCGTCACGGTCAACGTGAGTAGCGTGACCTTTACCCCAACGACCTTCGCGAGTATGGCAGGCTTCATTGTCAATGGTAAGGATGCGTTGGTGTTTACACCAACGAGTTTCGGTGGGTTGACATACAGTATTGTTGACGTCATAAGTCATCAAAGCTACAAGTACAGTGCGTCGGCTTGGGCGGTAGACACCGTGGTAGATTTAAGTGGTCTGCCAGCCGAACTTAGAGTTGGGCGTCTGATCTGTAACTTGGGTAGTGGGGAGAGTTTTGTTCCTGTCTCAAGTTCAGGGTTCGCCGTTATCAATCCACCGACTGCAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f35571edb81c7ae75ca79a650ae5193ca964c2b0286a8d9c48e7acba728fae7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6337
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of four novel bacteriophages infecting Klebsiella pneumoniae Estrada Bonilla,B., Costa,A.R., van Rossum,T., Hagedoorn,S., Wallinga,H., Xiao,M., Song,W., Haas,P.-J., Nobrega,F.L. and Brouns,S.J.J. 2021-03-02 — GenBank