Protein

View in Explore
Genbank accession
AUS01886.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
MKRLLILAALLTFSSSAFAMPAAVIGVVVALGASAVGVTVATAIAIGMAAASFYMASNAKVPSPSKSQSELKQLLRSSRAAKQVVYGKGFFSGAMIYAEEQEGDKESDDGTYAEYLYMAVGICNHPVEQVHNIYLNETDIGEFDQIVDYKFHNNPTTVDQYLVDNSPSWKSDMIGKGTSWLRLGMKFDRDKFANGVPTPRVELSGENRIWDPRTDSIGYTNNAALVIADFMIRYRGYTRDRIITQGFGSFIDAANLCDENVTNPDGTVNDRYTINGLFAMDEKPGQVLDDMLTACGGQLVRIGGKIGLLPAAYYGPATFTITSSDLLDDNSVQIQPEPSYGDSVNTIKGTFIDPTQNYVETDYPTVSDANALARDGGELATDLNFRFVTNPYQAQRLADIELRRSITGGSVVIKTNLRGLYARLGRVIKLDIKELGIIGEYRVVNASNHIMNGVELSLVRDVIEIYDDATGKPFVPPPLTNLPIGGIAPPTGVQFLVESIGEVVQGQIQWQINAPQYASNDVRIKKTSNNKIIQVGSSIGNTYKINGLPADNYTVEVRSVDMRGAVSTWASASFVVDIPNVPSSVTVNRSNWNLELIPNIAGGIPTGTLFEFWYLADGASYIKDAPTYGSGDRNKAVKIFTGSSFNHGGRTPDRWHHYWIRSVSVYGKSDYTYVQTGTTREQDLVTTVVERLEAIEIQSANWTPNPTTGISQYGYKLFSPASSKVTLPDGTVLENPDGLAVFQDAVINGHITAKSLTFINDAAIPGSIKNSNVTKVSIGAYPDQNSIQIKSSNYAAGVQGWAIDKNGNAEFNNGVFRGTLYAPDIEGDVYSAVTWDVQAMRSHVAYRGTPSEVPYLAFAITNVTGMSRILVIPPIQCDTQGFRLYEDGVHVLNIPAIDDPGGFDDITEQVYHRVTTSGAYGRAINYSLRTYDYIDPGSSIASKAIRIPKQVVQMYYGKANVILG
Physico‐chemical
properties
protein length:964 AA
molecular weight: 104970,84920 Da
isoelectric point:5,20170
aromaticity:0,09544
hydropathy:-0,15788

Domains

Domains [InterPro]
DC_0187
STR
1–935
DC_0187
IPR053171
Unmapped
442–680
IPR053171 IPR015406
IPR057587
ATT
581–685
IPR057587
AUS01886.1
1 964
Architecture
STR
ATT
STR
STR 1-580 | ATT 581-685 | STR 686-935 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS01886.1
1 964
Domain Start End Length (AA) Confidence
N-terminal 1 619 619 0,7570
Central domain 620 818 200 0,1265
C-terminal 819 964 145 0,9624
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-619
Central
620-818
C-terminal
819-964

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.044.O._10N.261.51.B8
[NCBI] 		1881376 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01886.1 [NCBI]
Genbank nucleotide accession
MG592661.1 [NCBI]
CDS location
range 20014 -> 22908
strand +
CDS
ATGAAAAGGTTGTTGATTCTAGCAGCACTATTGACGTTCTCGTCGTCAGCATTTGCTATGCCAGCTGCTGTGATAGGTGTGGTTGTAGCGTTAGGTGCCAGTGCGGTAGGTGTTACCGTTGCCACCGCTATCGCCATCGGTATGGCTGCTGCGTCGTTCTATATGGCGTCAAATGCTAAAGTACCTAGCCCGTCAAAATCTCAGTCAGAACTTAAGCAGTTATTACGTAGTTCACGTGCAGCTAAGCAGGTGGTTTACGGTAAAGGTTTCTTCTCCGGTGCAATGATATACGCTGAAGAACAAGAGGGTGATAAAGAGAGTGATGACGGTACGTACGCTGAATACTTGTACATGGCTGTCGGCATATGTAACCACCCGGTTGAACAGGTCCACAACATCTACTTGAATGAGACTGACATTGGTGAGTTTGACCAAATCGTAGACTACAAATTCCACAATAATCCAACCACCGTCGACCAATACTTAGTTGACAACTCTCCATCGTGGAAGAGTGACATGATAGGTAAAGGTACATCTTGGTTGCGATTAGGTATGAAGTTTGACCGTGACAAGTTCGCTAATGGTGTACCGACTCCACGTGTTGAACTGTCAGGTGAGAATAGAATATGGGACCCTCGTACAGACTCCATTGGCTACACTAATAATGCAGCTCTCGTTATTGCTGACTTCATGATTCGATACCGTGGCTATACTCGTGACCGCATCATCACTCAAGGTTTCGGTTCGTTTATTGACGCTGCCAACTTATGTGATGAGAACGTAACCAACCCTGACGGAACCGTTAACGACCGCTACACCATCAATGGTCTATTCGCTATGGATGAGAAACCTGGCCAAGTGCTTGACGACATGTTAACCGCTTGTGGTGGTCAACTTGTTCGTATCGGTGGGAAGATAGGTTTACTCCCTGCCGCTTATTACGGTCCAGCCACGTTCACCATCACTAGCTCAGACTTACTTGACGACAACAGTGTACAGATTCAACCTGAACCAAGTTACGGTGACTCGGTGAACACCATTAAAGGTACGTTTATCGACCCTACTCAAAACTACGTTGAGACTGATTACCCGACTGTGTCTGACGCTAATGCTTTAGCTCGTGACGGCGGTGAACTTGCTACTGACCTTAACTTCCGTTTTGTGACTAACCCATATCAAGCTCAACGTCTCGCTGACATCGAGTTACGTCGTTCAATAACAGGTGGTTCAGTAGTAATCAAAACCAACCTGAGAGGTCTGTACGCTCGTTTAGGTCGTGTAATTAAACTGGACATCAAAGAGTTAGGTATCATCGGTGAGTACCGCGTAGTTAACGCATCCAACCATATAATGAACGGTGTTGAATTATCTTTAGTACGTGACGTGATTGAGATATATGACGACGCAACAGGTAAACCGTTCGTACCACCGCCACTGACTAACTTACCTATAGGCGGTATAGCTCCTCCAACTGGTGTCCAATTCTTGGTTGAGTCAATCGGTGAGGTTGTACAAGGTCAGATTCAATGGCAAATTAACGCACCTCAGTACGCGTCTAATGACGTCAGAATTAAGAAGACATCTAACAATAAGATAATCCAAGTGGGTAGCTCGATAGGTAACACTTACAAGATTAACGGTCTACCTGCTGACAATTACACTGTCGAAGTTCGTAGTGTTGACATGAGAGGTGCTGTGTCTACGTGGGCTTCAGCAAGCTTCGTTGTGGACATCCCTAATGTACCTTCATCAGTGACGGTGAACCGTTCAAACTGGAACCTTGAGCTAATACCTAACATCGCTGGTGGTATACCTACAGGTACTCTCTTCGAGTTCTGGTATTTAGCTGATGGTGCCAGTTACATTAAAGATGCACCGACATACGGGTCAGGTGATAGAAATAAGGCCGTTAAGATATTCACCGGGTCGAGCTTTAACCACGGTGGCCGTACGCCAGACAGATGGCACCACTACTGGATTCGTAGTGTCAGCGTGTACGGCAAGTCTGATTACACTTACGTACAAACAGGTACAACAAGAGAGCAAGACCTGGTTACGACTGTCGTTGAACGTCTTGAGGCTATCGAGATTCAATCAGCCAACTGGACACCTAACCCTACCACTGGTATCAGTCAGTACGGTTACAAACTGTTCTCACCTGCGTCATCTAAAGTAACTCTACCTGACGGTACAGTCTTGGAGAACCCTGACGGGTTAGCTGTATTTCAAGATGCAGTAATCAACGGTCACATCACAGCCAAGTCTTTGACGTTCATCAATGATGCAGCTATACCCGGTTCCATCAAGAATAGTAACGTAACCAAGGTTTCAATAGGTGCTTACCCTGACCAGAATTCAATTCAGATTAAGTCAAGTAACTACGCAGCAGGGGTCCAAGGGTGGGCTATTGATAAAAATGGTAATGCTGAGTTCAACAACGGTGTATTCCGTGGGACACTTTATGCACCTGACATAGAAGGTGACGTCTACTCGGCTGTAACTTGGGATGTTCAGGCTATGAGAAGTCACGTAGCGTACAGAGGTACACCGTCTGAGGTTCCATACTTAGCCTTCGCTATCACCAACGTCACAGGGATGAGTAGAATACTCGTGATACCACCTATACAGTGTGACACTCAAGGTTTCAGACTGTATGAGGACGGGGTCCATGTGTTAAATATCCCTGCAATAGATGACCCTGGTGGTTTCGATGACATAACTGAACAGGTTTATCATAGGGTTACAACTAGTGGTGCTTACGGTAGAGCAATTAACTATTCACTCAGGACTTATGATTACATTGACCCTGGGTCATCAATAGCATCAAAGGCAATACGCATCCCTAAACAAGTTGTACAAATGTACTACGGTAAAGCTAACGTAATATTAGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
adcae55506e509f8b12994758d3655bc29d56657f3a862e8d35a9f6905990e34
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7378
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank