Protein

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Genbank accession
GENB_c432adef41cc [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDHTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINTKNELLTHTDGKYRWDGALPKIVDAGSTPTTTGGVGIGAWLSVGDASLRVELSSSADGKGSSLIAHGSGTVFDELNSRLPISRFVDTTGVLPADDGLIEALAYSAAHGLTLDITGKVRITKTVKQPPNSSVDCRNGVIFCEDPSGLENGLMWSVDDPGIVNEKTTRIGTLILSTSPEIEEGLVADRNVFGLQITTPKVIVENLYTYGCRLGGLKTGPKGYEITIKNATCFITSWTDKTKWGIELAAADGINGSLVTTGYARGISSSGTNHIDFCHPWGFPATSGNEYQNRQLLTALSLASNTHVTHCYLDSVDTEGYDVAQSGNDGVNIVFNGFNSTIDKCFILIHSQTKPGKVKIYNGIGTQNTISNLMVNNDSALGTPAVIYPSAVRKWQNHVLGGNVTYLTNRFTYPASSLIAGGGFTGNIEFRKEGIDNIRVTAKITCTDANITDANFGISLPDSLGIDNTVGNITSRTMLTSSAGNQTDITFENGKIYPIRISEAAGSYVYFAKADVRLGNLNFVINALNTTTAY
Physico‐chemical
properties
protein length:966 AA
molecular weight: 102710,29990 Da
isoelectric point:4,76199
aromaticity:0,08075
hydropathy:-0,10507

Domains

Domains [InterPro]
DC_1064
ATT
4–188
DC_1064 DC_0397
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_1603
IPR040775
RBD
416–481
IPR040775
GENB_c432adef41cc
1 966
Architecture
ATT
ATT
STR
ATT 4-188 | ATT 248-583 | STR 584-961 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_c432adef41cc
1 966
Domain Start End Length (AA) Confidence
N-terminal 1 528 528 0,9970
Central domain 529 830 303 0,9852
C-terminal 831 966 135 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-528
Central
529-830
C-terminal
831-966

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se-B
[NCBI] 		2700089 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871491.1_CDS_[91848..94748] [NCBI]
Genbank nucleotide accession
MN871491.1 [NCBI]
CDS location
range 91848 -> 94748
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
a34854aa14c3c25cf7f8d172d3227db621cbafcaf7673f910e582e28b4083615

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6728
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50