Protein

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Genbank accession
XLQ29406.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANVIKTVLTYPLDGSTRDFNIPFEYLARKFVVVTLIGKDRKVLTINADYRFATRTTISLTKAWGPADSYETIEVRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTSDTIGVNNDGHLDARGRRVVNVADGIDPGDAVTVGQMNRWSGSAADSANKAKTSENNAKTSETNSKASEQLAKKWAENPKGTPVVPNQYSAKHWALTSEESANASAISAGNSQAQVANAKAQADRAGDYANDALGYRDAANTSAQQAAVSESNAATSASSAKTESDKLIQFNTLVDRINGVAVRQVGEFEIHNSRTYAKPGTVYGDGQLLNRNQFPALVAELLAGHLPVVSDDVWLADPGKRGCYTLGNGTTTFRVPDLNGVYAGSIKAPVFRGDAGFTVGDVQKSALPNIEGLITLADNELASSASGAFYNAGRSNKGATNDTGGAQLGFDASLWNDVYKKDINEARMNGIVIVWVIRTHGVVNNPGSVDAAVLASRVEQVYTELLTRMVTNENLEKSGQKFLRRVFSDRTSQGQLATGRTVTCSEDILNKMLVIGAHTDSQNPNSQVYRCSPFLQPNTADRMHITLANWSYTLEFPAANQVKLVAATGSGVQAINYIDVVCDYPQT
Physico‐chemical
properties
protein length:625 AA
molecular weight: 67270,00380 Da
isoelectric point:5,86694
aromaticity:0,07040
hydropathy:-0,33264

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 DC_1514
DC_1263
ATT
1–341
DC_1263 DC_1538
IPR011049
STR
119–156
IPR011049 SSF88874
XLQ29406.1
1 625
Architecture
ATT
STR
RBD
ATT 1-341 | STR 342-517 | RBD 518-625
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KKE5P
[NCBI] 		3366622 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ29406.1 [NCBI]
Genbank nucleotide accession
PQ356293.1 [NCBI]
CDS location
range 20974 -> 22851
strand -
CDS
ATGGCTAACGTAATTAAGACCGTTTTGACTTACCCGTTAGATGGCTCAACTCGTGATTTTAATATCCCGTTTGAGTATCTGGCCCGTAAGTTCGTAGTGGTAACTCTTATTGGTAAGGACCGTAAAGTGCTTACCATCAATGCAGACTACCGATTCGCTACTCGAACAACCATATCCCTAACTAAGGCTTGGGGTCCGGCTGATAGCTATGAAACCATCGAGGTACGGCGGGTTACATCCACTACCGACCGATTGGTTGACTTTACAGATGGCTCTATCCTCCGTGCGTATGACCTTAACGTGGCCCAGATTCAGACTATGCATGTGGCAGAAGAGGCGCGAGATTTAACGTCTGACACTATAGGTGTAAACAACGATGGTCATCTAGATGCGCGTGGTAGACGTGTGGTGAATGTAGCGGATGGCATTGACCCCGGTGACGCTGTTACGGTTGGTCAGATGAATCGCTGGTCTGGTAGTGCCGCCGATAGTGCGAACAAAGCGAAGACTTCTGAGAATAACGCTAAGACCTCTGAGACAAACTCAAAGGCTTCCGAGCAGTTGGCGAAGAAGTGGGCTGAGAACCCTAAAGGTACACCCGTGGTCCCCAATCAGTATTCCGCTAAGCATTGGGCGTTGACCTCTGAGGAAAGCGCTAATGCGTCTGCAATCTCTGCGGGTAACTCTCAGGCACAAGTAGCGAACGCTAAGGCACAGGCTGACCGTGCTGGTGATTACGCCAATGATGCTCTGGGTTACCGCGATGCAGCCAACACGTCTGCTCAACAGGCCGCTGTATCTGAGAGCAACGCTGCGACATCTGCAAGTAGTGCAAAGACTGAATCCGATAAGCTAATTCAGTTTAACACTCTGGTTGACCGGATTAACGGCGTGGCCGTACGTCAGGTTGGTGAGTTTGAGATTCACAACTCTCGTACTTACGCTAAGCCGGGTACAGTATACGGTGACGGGCAACTATTGAACCGCAACCAGTTCCCTGCACTAGTCGCTGAGTTACTGGCAGGGCACCTCCCGGTTGTCTCTGACGACGTATGGCTTGCTGACCCCGGTAAACGTGGTTGCTATACCTTAGGTAACGGTACGACCACTTTCCGTGTACCAGACCTAAACGGTGTCTATGCGGGTTCCATTAAGGCTCCTGTGTTCCGTGGTGACGCTGGGTTTACTGTAGGTGACGTTCAGAAGTCAGCTCTACCAAACATTGAGGGTCTGATTACACTTGCCGATAATGAGCTGGCCTCCAGTGCCTCTGGTGCATTCTACAACGCTGGGCGCTCCAACAAAGGTGCAACTAACGATACCGGTGGTGCTCAGTTAGGTTTCGACGCGTCACTGTGGAACGACGTCTACAAGAAGGACATTAATGAAGCCCGTATGAATGGCATCGTGATTGTCTGGGTTATCAGGACTCACGGTGTTGTCAACAATCCGGGTTCAGTGGATGCCGCTGTGTTGGCTTCTCGCGTCGAGCAGGTTTATACCGAACTACTTACACGTATGGTTACTAATGAGAACCTCGAGAAGTCTGGACAGAAGTTCCTTCGCCGAGTGTTTAGCGACCGCACGTCTCAAGGACAACTTGCGACTGGAAGAACAGTGACTTGCTCTGAGGATATTCTCAACAAGATGCTAGTAATTGGCGCACACACCGATAGCCAAAACCCCAACTCTCAGGTATACCGTTGTAGCCCGTTCCTCCAGCCAAACACTGCTGACCGAATGCACATCACTCTAGCTAACTGGTCGTACACCTTAGAGTTCCCTGCGGCGAATCAAGTTAAACTAGTAGCGGCTACAGGTTCTGGAGTACAGGCAATCAACTATATTGACGTAGTGTGTGACTACCCACAAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3b3da5f25a46fad52af67fcdcca6f6602ada9e8f02ac1ad6c5293f8a1a07d76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Direct submission of Escherichia Phage Genome Khan,R., Singh,S. and Kondabagil,K. 2024-01-17 — GenBank