Protein

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Genbank accession
YP_006589990.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 0,61
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MALKLSNNGVGFLAAALAANGDTIALQPGQGEAFPVLAAGDWCPGTLVNAAGHVEIVRVTARSDDTFTVLRAQEGTQALPFVPGDRFEHRLTAGTLTAMFNALTAAIKQIRPRVGDIKVWRGAIADIAAVHGPGWQLADGTNGTTDLRDRFIVGAGTSYAPGTTGGANTVVLAATQMPAHNHAVSDPGHAHGVSDPSHAHSVYDPGHAHNTYSNYYNLGAQGSGTVTPYNGSGQVVSGGAVLTGYTGIGIYGAYTGIAIQGAYTGVSTQNAGGGAAHENRPPYYALAFIEYTGIGAADPLAS
Physico‐chemical
properties
protein length:302 AA
molecular weight: 30765,74690 Da
isoelectric point:6,01171
aromaticity:0,07947
hydropathy:-0,01523

Domains

Domains [InterPro]
DC_0891
STR
1–298
DC_0891
cd22641
STR
63–292
cd22641
SSF88874
STR
115–289
SSF88874
YP_006589990.1
1 302
Architecture
STR
STR 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006589990.1
1 302
Domain Start End Length (AA) Confidence
N-terminal 1 283 283 0,5972
Central domain 284 291 9 0,0011
C-terminal 292 302 10 0,9934
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-283
Central
284-291
C-terminal
292-302

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage DC1
[NCBI] 		2881398 Uroviricota > Caudoviricetes > Lessievirus >
Host Burkholderia cepacia
[NCBI] 		292 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006589990.1 [NCBI]
Genbank nucleotide accession
NC_018452 [NCBI]
CDS location
range 38873 -> 39781
strand +
CDS
ATGGCTCTCAAGCTCTCGAACAACGGCGTCGGGTTTCTGGCTGCCGCGCTGGCCGCCAACGGCGATACGATCGCGCTTCAGCCCGGACAAGGCGAGGCGTTCCCGGTCCTTGCCGCCGGCGACTGGTGCCCCGGCACGCTCGTCAACGCGGCCGGCCACGTCGAGATCGTGCGCGTCACGGCGCGCTCCGACGACACGTTCACGGTGCTGCGCGCGCAGGAAGGCACCCAGGCGCTTCCGTTCGTTCCGGGCGATCGCTTCGAGCACCGCCTGACCGCCGGCACGCTCACGGCGATGTTCAACGCCCTGACGGCGGCTATCAAGCAGATTCGGCCGCGCGTGGGTGACATCAAGGTGTGGCGTGGCGCGATCGCGGACATCGCGGCGGTGCACGGGCCCGGCTGGCAGCTCGCAGACGGCACGAACGGCACGACCGACCTACGCGACCGGTTCATCGTGGGCGCCGGCACATCGTATGCGCCGGGCACGACGGGCGGCGCCAATACGGTCGTGCTCGCCGCGACCCAGATGCCGGCGCACAATCACGCGGTATCCGATCCGGGCCATGCTCACGGGGTAAGCGATCCGAGCCACGCGCATAGCGTCTATGACCCCGGCCACGCCCACAACACGTACTCGAACTACTATAACCTTGGCGCTCAGGGCAGCGGAACGGTGACGCCGTACAACGGGAGTGGTCAGGTCGTGTCCGGCGGCGCCGTGCTCACCGGCTACACCGGCATCGGCATCTATGGCGCCTACACCGGCATCGCGATCCAAGGCGCTTACACCGGCGTCAGCACCCAGAACGCGGGCGGCGGGGCAGCGCACGAGAACCGGCCGCCGTATTACGCGCTGGCGTTCATCGAGTACACCGGGATTGGAGCGGCCGACCCTCTGGCATCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0be90b87d465a37b9bf9efd8b17b4e9e4f55cd726550121f99c47a17f65e9bb2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8159
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50