Protein

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Genbank accession
XCO39710.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALIRLVAPERVFSDLASMVAYPNFQVQDKITLLGSAGGDFTFTTTASVVDNGTVFAVPGGYLLRKFVGPAYSSWFSNWAGIVTFMSAPNRHLVVDTVLQATSVLNIKSNSTLEFTDTGRILPDAAVARQVLNIIGSAPSVFVPLAADAAAGSKVITVAAGALSAVKGMYLYLRSNKLCDGGPNTYGVKISQIRKVVGVSTSGGVTSIRLDKALHYNYYLSDAAEVGIPTMVENVTLVSPYINEFGYDDLNRFFTIGISANFAADLHIQDGVIIGNKRPGASDIAGRSAIKFDNCVDSTVKGTCFYNIGWYGVEVLGCSEDTEVHDIHAMDVRHAISLNWQSTADGDKWGEPIEFLGVNCEAYNTTQAGFDTHDIGKRVKFVRCVSYDSADDGFQARTNGVEYLNCRAYRAAMDGFASNTGVAFPIYRECLAYDNVRSGFNCSYGGGYVYDCEAHGSQNGVRINGGRVKGGRYTRNSSSHIFVTKDVAETAQTSLEIDGVSMRYDGTGRAVYFHGTMGIDPTLVSMSNNDMTGHGLFWALLSGYTVQPTPPRMSRNLLDDTGIRGVATLVAGEATVNARVRGNFGSVANSFKWVSEVKLTRLTFPSSAGALTVTSVAQNQGVPTPNPDLNSFVIRSSNAADVSQVAWEVYL
Physico‐chemical
properties
protein length:651 AA
molecular weight: 69909,83920 Da
isoelectric point:5,91446
aromaticity:0,09985
hydropathy:0,00015

Domains

Domains [InterPro]
IPR057094
ENZ
1–71
IPR057094 DC_0267 DC_1484
IPR012334
STR
31–590
IPR012334
IPR057095
ENZ
141–230
IPR057095 IPR011050 IPR056204
IPR011050
STR
358–472
IPR011050
XCO39710.1
1 651
Architecture
ENZ
STR
ATT
STR
ENZ 1-30 | STR 31-71 | ATT 72-145 | STR 146-651
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39710.1
1 651
Domain Start End Length (AA) Confidence
N-terminal 1 78 78 0,9862
Central domain 79 565 488 0,9947
C-terminal 566 651 85 0,9500
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-78
Central
79-565
C-terminal
566-651

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146034
[NCBI] 		3232214 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39710.1 [NCBI]
Genbank nucleotide accession
PP889484.1 [NCBI]
CDS location
range 3666 -> 5621
strand +
CDS
ATGGCATTAATTAGATTAGTAGCTCCCGAGCGGGTGTTCTCCGACTTGGCGAGCATGGTAGCATACCCAAACTTTCAGGTGCAGGACAAGATTACCCTGCTGGGCAGTGCCGGTGGGGATTTCACCTTTACTACTACTGCGTCGGTAGTGGATAACGGAACCGTGTTTGCTGTACCCGGTGGGTACCTGCTACGTAAATTCGTGGGTCCAGCATACAGCTCCTGGTTCAGCAACTGGGCGGGCATAGTCACGTTCATGAGCGCGCCTAATAGGCACCTGGTTGTGGACACGGTCCTGCAGGCCACGAGTGTGCTCAACATCAAAAGCAACTCTACGCTAGAGTTTACCGATACCGGAAGAATCCTACCGGATGCTGCGGTTGCACGTCAAGTGCTTAATATTATCGGCTCGGCACCCTCGGTGTTCGTACCGTTAGCAGCGGATGCCGCGGCGGGCAGTAAAGTCATTACGGTGGCTGCTGGGGCTTTGTCTGCGGTAAAAGGTATGTACTTGTATCTTCGCTCTAACAAGCTGTGTGATGGTGGTCCTAACACCTACGGTGTAAAGATTTCCCAGATTAGGAAAGTGGTGGGGGTTAGCACCTCCGGTGGCGTCACCAGTATTCGGCTGGATAAAGCGCTGCACTATAACTACTACCTGTCTGATGCCGCGGAAGTAGGTATCCCGACAATGGTGGAGAACGTAACCTTAGTATCCCCGTACATCAACGAGTTCGGCTACGACGATTTGAACCGGTTCTTTACTATCGGTATCTCTGCCAACTTTGCCGCGGACTTGCACATCCAGGACGGGGTTATTATTGGCAACAAACGCCCAGGGGCTTCTGATATAGCAGGGCGTAGTGCTATCAAGTTCGATAACTGCGTAGATAGTACCGTTAAGGGTACGTGCTTCTACAACATCGGATGGTATGGGGTAGAGGTGCTCGGCTGCTCAGAGGACACGGAAGTACACGATATCCACGCCATGGACGTACGCCACGCAATCTCTCTGAACTGGCAGAGCACTGCAGACGGGGACAAGTGGGGAGAGCCTATCGAGTTCTTAGGCGTTAACTGCGAAGCCTACAACACAACCCAGGCTGGGTTTGATACTCATGACATTGGTAAGCGTGTGAAGTTCGTTCGCTGCGTTTCGTACGACAGTGCTGACGATGGGTTCCAAGCGCGCACTAACGGGGTGGAGTACTTGAACTGTCGAGCTTACCGTGCAGCTATGGACGGGTTCGCCTCCAACACCGGTGTAGCCTTCCCTATCTATAGGGAGTGCCTAGCTTATGACAACGTACGCTCTGGCTTTAACTGCTCGTACGGCGGTGGCTACGTTTATGACTGCGAGGCTCACGGTAGCCAGAATGGTGTGCGAATCAACGGGGGCCGTGTTAAGGGTGGTCGGTACACCCGCAACTCCAGCTCTCACATCTTCGTCACTAAGGACGTAGCTGAGACAGCGCAGACATCCCTGGAGATTGATGGCGTGAGCATGCGCTACGACGGTACCGGGAGAGCTGTGTACTTCCACGGGACTATGGGCATTGACCCTACCCTGGTATCTATGTCCAATAACGACATGACCGGTCACGGCTTGTTCTGGGCATTGCTGAGCGGCTACACCGTTCAACCTACGCCTCCGCGCATGTCCAGGAACTTACTGGATGACACAGGTATCCGTGGAGTGGCAACGCTGGTTGCTGGCGAGGCTACAGTCAACGCCCGTGTACGCGGAAACTTTGGCAGCGTAGCTAACTCCTTCAAGTGGGTGTCTGAGGTTAAGTTGACGCGGTTGACCTTTCCCTCTAGTGCTGGGGCCTTGACGGTTACTAGCGTAGCTCAGAACCAGGGTGTGCCTACACCTAATCCGGACCTGAACAGCTTCGTGATTAGGAGCAGTAACGCAGCGGACGTATCCCAGGTAGCCTGGGAGGTGTATCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
adc9d9b76b44bbbcb2425067426e8b1c3f353727ff3ca48e7c6e5d0099a3582c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank