Protein

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Genbank accession
AMO43584.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSRYRRVNIDGKSLFKTETRKTAADLLPGTFAVINGSDLFAQASASVGRLYVIDCAHHEGLNIRDAVPAGHSAVGNYVEESRELAVLCPAGTYKKDTPIKLGTSGQGAIASSDTDTVLGYSQDDAVIASGETDFIRIRFRVGSVAAPAP
Physico‐chemical
properties
protein length:149 AA
molecular weight: 15745,48400 Da
isoelectric point:6,27516
aromaticity:0,06711
hydropathy:-0,11477

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMO43584.1
1 149
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0006
Central domain 11 138 129 0,0004
C-terminal 139 149 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-138
C-terminal
139-149

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YMC11/07/P54_PAE_BP
[NCBI] 		1777064 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMO43584.1 [NCBI]
Genbank nucleotide accession
KU310943 [NCBI]
CDS location
range 25726 -> 26175
strand -
CDS
ATGTCTCGCTATCGTCGCGTGAACATCGACGGCAAGTCGCTGTTCAAGACCGAAACCCGCAAGACCGCCGCGGATCTCCTGCCCGGCACGTTCGCCGTGATCAATGGCAGCGACCTGTTCGCCCAGGCAAGCGCAAGCGTTGGCCGACTCTACGTCATCGACTGCGCTCACCACGAAGGTCTCAACATCCGCGATGCGGTTCCCGCCGGCCATTCGGCCGTGGGCAACTACGTCGAAGAGAGTCGCGAACTCGCCGTGCTGTGCCCGGCCGGCACCTACAAGAAGGACACGCCGATCAAGCTCGGCACCAGCGGCCAGGGTGCCATCGCGTCGAGCGATACCGACACGGTCCTCGGGTACAGCCAGGACGATGCAGTCATCGCCTCCGGCGAAACCGACTTCATCCGCATCCGCTTCCGTGTCGGCAGTGTCGCCGCCCCGGCGCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f48364ee076cc581a2fe09ac1643f895508e05926206211272492b80a90cd76c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Pseudomonas phage YMC11/07/P54_PAE_BP Jeon,J., Yong,D. and Lee,K. 2012-12-15 — GenBank