Protein

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Genbank accession
QIG64435.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MARLGQFRGDTLENWKKENAIIPDREFILIASDASKPTTYDFWACGDGITHFEDLPMNGNGGGSGGAMTVLQGLGDNTESPMSQEAVTRYISEYIVSNYHTNPATGKNVFTALEAINLVPIYIRRLGLKCGFLTLVDPTQEITRLVMIQYIGKSLSESDWTNLNNWSSLDIQVESTLTVFIFKISPTEPATPVGGYWNTEANIVVYPEGWTGTDFSSEGDIVWMSVGIFGADGNLKGEWSKPIRITGENGTDGTDGSSIEFIYKLTKTDKVVPSTPDNRPNESQYVPEGWTNHPTGISLEMQVEWVCTRTKQENGVWNNWTTPVMWSKYGVNGKDGDGVEYIYKLNNTGVAPDRPTEVSQEPEFVPDGWTDNPSGISASNKYEWVCIRKFRDGLWGEFSNPALWAKYGDNGQTGNSARTMYCKTANASTVPEVNASNINPGSIWGVTIPSYSGTEVVWGIQAIVAYDNTLVQDWQGPYLITGINGKDGTPPNYKTYVFKLSDSKPSAPTSNDPTSPGGGWVDYPNQEGNWWQCVGSVNGVTGLVTEWGEVIPLNGRDGTAQDGKFTEFRFAKSSTSTPPTVSASARFPGGWTLSFPEISDSEILWMIKAVINPDDTLYSNWEGPIRISGERGPIGETGPAGKDGINGSQGVAGIPGVDIELRFSLGTDTTYDATWNNTVKTTRNPTSFGWSLQMPTPTDSKLYIWLIQARIAHQVNGDAGTLETGSWSEPIRLNGINGLPGPQGKKGQVVYPAGVYGNTVSYTTTETKAPYVYDPSDGNFYVLNAIMTWLGTEQNNRTPSQDYATNGGKYWLKFEAFEAVYAKIGIIANGLIGSAVFNGDYMFSQQGIDENGAVSTNYESFTGEENSPFNPNLLIDFSKGDLTYKGTSQILLYQMKDNENLTVTSKFGYNKIVTANNCTITLAKSGNENVEPHNIYVEGRAIYNYKNTKMYVNNVQLEDYLEYVSIVYDTTIKFSNGDIAYIYVDKNTFGTYSVVASGVAAVVSGSTIFGSANIGTLIFSTNGNVGIFTFDENEKRVLYPFKTQTVSAIPVKLSAVSEDYVNNAWWKFRAQIYRGGDSTDGYPILIFEVPSNTSTLPAQMSILGICNLITQDTM
Physico‐chemical
properties
protein length:1114 AA
molecular weight: 122111,34260 Da
isoelectric point:4,63365
aromaticity:0,11490
hydropathy:-0,35826

Domains

Domains [InterPro]
DC_0392
STR
29–259
DC_0392 DC_0392 DC_0392
DC_0392
STR
248–330
DC_0392 DC_0392 DC_0392
QIG64435.1
1 1114
Architecture
STR
STR 29-1108 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG64435.1
1 1114
Domain Start End Length (AA) Confidence
N-terminal 1 860 860 0,9666
Central domain 861 1103 244 0,6786
C-terminal 1104 1114 10 0,1724
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-860
Central
861-1103
C-terminal
1104-1114

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage DAC23
[NCBI] 		2710501 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG64435.1 [NCBI]
Genbank nucleotide accession
MT074142.1 [NCBI]
CDS location
range 76192 -> 79536
strand +
CDS
ATGGCTCGTTTAGGACAGTTTAGAGGAGATACATTAGAAAATTGGAAGAAAGAAAATGCTATAATTCCAGATAGGGAATTTATACTTATAGCATCAGATGCTAGTAAACCTACTACGTATGATTTTTGGGCTTGTGGAGATGGTATTACTCATTTTGAAGATTTACCAATGAATGGTAATGGTGGAGGAAGTGGAGGAGCAATGACTGTTCTTCAAGGTTTAGGTGATAATACTGAATCTCCAATGAGTCAAGAAGCAGTAACAAGATATATATCTGAATATATTGTATCTAATTATCATACTAATCCTGCTACTGGCAAAAATGTTTTTACTGCTTTAGAAGCTATTAATTTAGTTCCAATTTATATTAGAAGATTGGGTTTAAAATGTGGATTTTTAACTTTAGTAGACCCAACTCAAGAAATTACAAGATTAGTTATGATTCAGTATATAGGAAAATCTTTATCTGAATCAGATTGGACTAATTTAAATAACTGGAGCTCTCTTGATATTCAAGTAGAAAGTACTTTAACTGTTTTTATTTTTAAAATAAGTCCAACAGAACCAGCAACTCCTGTAGGTGGTTATTGGAATACAGAAGCTAATATAGTTGTTTATCCAGAGGGATGGACAGGAACAGATTTTTCTTCTGAAGGAGATATAGTTTGGATGTCTGTTGGTATATTTGGAGCAGATGGAAATTTAAAAGGAGAATGGTCTAAACCTATAAGAATTACAGGAGAAAATGGTACTGATGGTACTGATGGTTCCTCTATTGAATTTATTTATAAATTAACAAAAACAGATAAAGTTGTACCTAGTACTCCAGATAATAGACCTAATGAATCTCAATATGTTCCAGAAGGTTGGACTAATCATCCAACAGGAATTAGTTTAGAAATGCAAGTTGAATGGGTTTGTACAAGAACAAAACAAGAAAATGGTGTTTGGAACAATTGGACAACTCCTGTAATGTGGAGTAAATATGGTGTAAATGGTAAAGATGGTGATGGTGTTGAATATATTTATAAATTAAATAATACAGGTGTTGCTCCAGATAGACCTACAGAAGTATCTCAAGAACCTGAATTTGTTCCAGATGGTTGGACTGATAATCCTTCTGGTATTTCTGCATCAAATAAATATGAGTGGGTTTGTATTCGTAAATTTAGAGATGGTCTTTGGGGAGAATTTAGCAATCCTGCTTTATGGGCTAAATATGGAGATAATGGACAAACAGGTAATAGTGCTAGAACAATGTATTGCAAAACTGCAAATGCTAGTACTGTTCCAGAAGTAAATGCTAGTAATATAAATCCAGGTAGTATTTGGGGGGTTACTATTCCTAGTTATTCTGGTACTGAAGTTGTTTGGGGTATTCAAGCAATTGTTGCTTATGATAATACCTTAGTCCAAGATTGGCAAGGTCCTTATTTGATTACAGGTATTAATGGAAAAGATGGAACTCCTCCTAATTATAAAACTTATGTATTTAAATTAAGTGATTCTAAACCTAGTGCTCCTACTAGTAATGACCCAACTTCTCCAGGTGGAGGTTGGGTAGATTATCCTAATCAAGAAGGTAATTGGTGGCAATGTGTAGGTAGTGTAAATGGTGTTACAGGATTAGTTACAGAATGGGGTGAAGTTATTCCTTTAAATGGTAGAGATGGTACTGCTCAAGATGGTAAATTTACAGAGTTTAGGTTTGCTAAATCTTCAACAAGTACTCCCCCAACCGTTTCAGCATCAGCCAGATTTCCCGGTGGTTGGACACTTTCATTTCCTGAAATTTCAGATTCTGAAATCCTATGGATGATTAAAGCTGTTATTAATCCAGATGATACTTTATATTCAAATTGGGAAGGACCTATTAGAATAAGTGGAGAAAGAGGTCCCATAGGAGAAACTGGTCCTGCTGGTAAAGATGGTATTAATGGAAGTCAAGGTGTTGCAGGTATTCCAGGAGTAGATATAGAATTAAGATTTAGTTTAGGTACTGATACTACTTATGATGCTACTTGGAATAATACTGTTAAAACAACAAGAAATCCTACTTCCTTTGGTTGGTCTTTACAAATGCCTACACCAACAGATTCTAAACTTTACATTTGGTTAATTCAAGCTAGAATTGCACATCAAGTAAATGGAGATGCAGGTACTTTAGAAACTGGTTCATGGTCTGAACCAATTAGATTAAATGGTATAAATGGATTACCTGGTCCTCAAGGTAAAAAGGGACAAGTTGTATATCCTGCTGGAGTTTATGGAAATACAGTTAGTTATACAACAACAGAAACAAAAGCTCCTTATGTATATGACCCAAGTGATGGTAATTTTTATGTACTTAATGCTATAATGACATGGTTAGGTACAGAACAAAATAATAGAACTCCTTCACAGGATTATGCTACTAATGGTGGTAAATATTGGTTGAAATTTGAAGCTTTTGAAGCAGTTTATGCTAAAATTGGTATTATTGCTAATGGTTTGATTGGTTCTGCTGTATTTAATGGTGACTATATGTTTAGTCAACAAGGAATTGATGAAAATGGTGCTGTTTCTACTAATTATGAAAGTTTTACTGGAGAAGAAAATTCACCTTTTAATCCAAATTTATTAATAGATTTTTCAAAAGGAGATTTAACTTATAAGGGAACTTCTCAAATACTTTTATATCAAATGAAAGATAATGAAAATCTTACTGTTACTAGTAAATTTGGATATAATAAAATTGTAACTGCAAATAATTGTACAATTACTCTTGCTAAAAGTGGAAATGAAAATGTTGAACCACATAATATATATGTAGAAGGTAGAGCTATTTACAATTATAAAAATACAAAAATGTATGTTAATAATGTTCAATTAGAAGATTATTTAGAATATGTTTCAATTGTTTATGATACTACAATTAAATTTAGTAATGGAGATATAGCTTATATATATGTAGATAAAAATACTTTTGGTACTTATTCTGTAGTAGCTAGTGGAGTGGCTGCTGTAGTTTCTGGAAGTACAATATTTGGAAGTGCAAATATTGGAACTTTAATATTTTCTACAAATGGTAATGTAGGTATTTTTACTTTTGATGAAAATGAAAAAAGGGTATTATATCCTTTTAAAACTCAAACAGTTAGTGCTATACCTGTAAAATTATCTGCTGTTAGTGAAGATTATGTAAATAATGCTTGGTGGAAATTTAGAGCTCAAATTTATAGAGGTGGAGATTCAACAGATGGATATCCTATATTAATTTTTGAAGTTCCTTCTAATACTAGTACTTTACCAGCTCAAATGTCTATTTTAGGAATTTGTAATTTAATTACTCAAGATACAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0d266e09d9e27900c1712a7a45f2d3693065f5cb6368072aa97d10e83315142
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2656
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank