Protein

View in Explore
Genbank accession
XWX36431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKVVYLWKNGQAIIVHKNEEDEYVYPDEKWTENKPPQGIILPCYYDGKQWVGQTQDELEKMLPEVEIPVDDKDIAIAKLTSLVVDLQEEVMSLKQNIALITEEQANQKLGEA
Physico‐chemical
properties
protein length:112 AA
molecular weight: 12902,53720 Da
isoelectric point:4,39743
aromaticity:0,07143
hydropathy:-0,51607

Domains

Domains [InterPro]
DC_0222
STR
1–112
DC_0222
Coil
Unmapped
76–103
Coil
XWX36431.1
1 112
Architecture
STR
STR 1-112
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_91
[NCBI] 		2815643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX36431.1 [NCBI]
Genbank nucleotide accession
MZ417352.1 [NCBI]
CDS location
range 38226 -> 38564
strand -
CDS
ATGAAAGTAGTTTATTTATGGAAAAATGGACAAGCAATTATTGTTCACAAAAACGAAGAAGATGAATATGTTTATCCTGATGAAAAATGGACTGAGAACAAACCTCCTCAAGGTATTATCTTACCTTGCTATTATGACGGTAAACAATGGGTTGGACAAACCCAAGATGAGCTAGAAAAGATGTTGCCTGAAGTAGAAATTCCTGTTGATGACAAAGATATTGCTATAGCTAAATTAACTAGCTTAGTTGTCGATTTACAAGAAGAAGTTATGAGTTTGAAGCAGAACATCGCACTAATAACTGAAGAACAAGCAAATCAAAAATTGGGGGAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8e9c766ea712b7496a829eec2e6d505b182f538c3a48b5faa624f878a30e3d2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9282
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank