Protein

View in Explore
Genbank accession
YP_010670568.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MARKDKERKPLKNPLELTSKSRSFRPAKKDVEENNKSLESFHSFMEESLGIDIQVPEELTPEQKIVYVQQPVVEQIVEEVIEEVVEEPKTEIEVLADQVADLIAKPEEKVEVTESLEKKVQIIERSIGELRNLTMEVAHGTSVSGLGFTAGGGEVRLQGLDDVSFTESALLNGQSLVWSATEGKWIAATVSGGGGGGAVDSVNGEFGVVVIDADDVDDTTTTNKFATQAELDSISTALQPADIGVSVQAFDANVVIDANYVATDENFTTADHAKLDGIAAGAEVNVQSDWNATSGDALILNKPTLFSGSYNDLTDQPTLFSGSYTDLTNQPTLFSGSYNDLTDQPTLFSGAYADLTGTPTLFSGSYNDLTDTPTIPPAAPVDSVNTQTGAVVLDADDIDDTTTLHKFATAAQLSAADSAVQPGDLAAVATSGAYGDLTGTPTLFSGSYNDLTDTPTIPTNNNELTNGAGYITGYTVTEGDVTAHQASLTIAQSQVTNLTTDLAAKADLVGGVIPNSQLPSLAISEYLGTVSDQTALLALTGQRGDWAIRTDTGSTWVITTDGGSTITDWTELATPADAVTSVNGFTGTVVLGASDVGAATAAQGSTADSAVQPGDLATVATTGAYSDLTGAPTVVSAFTNDAGYITSADGGDAATLDTLDSTQFLRSDTDDTMDGNLTVNGDVTFTDTATDSLAGPEFSLYRNSASPTAGDYLGQIRFDGKNSNGGDQLYAKITGKTSDVTLGSEDGLIEYAVVKAGTQTIVQRLTGSALKLINGTSLEVNGDITTDGTLSAAGIDIDSLPTLP
Physico‐chemical
properties
protein length:804 AA
molecular weight: 83476,18850 Da
isoelectric point:4,05003
aromaticity:0,05721
hydropathy:-0,15945

Domains

Domains [InterPro]
DC_2218
STR
6–390
DC_2218
Coil
Unmapped
113–133
Coil DC_1656
YP_010670568.1
1 804
Architecture
STR
STR 6-564 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670568.1 [NCBI]
Genbank nucleotide accession
NC_070965.1 [NCBI]
CDS location
range 26536 -> 28950
strand -
CDS
ATGGCCCGCAAGGACAAGGAGAGAAAGCCGCTAAAGAACCCCCTGGAACTTACTTCTAAGTCTAGGTCCTTTCGTCCTGCCAAGAAAGATGTAGAGGAGAATAATAAGTCGCTTGAAAGCTTCCATAGTTTTATGGAGGAGTCTCTGGGTATTGATATTCAGGTTCCCGAGGAACTCACCCCAGAGCAAAAGATTGTTTATGTTCAGCAGCCAGTTGTTGAGCAGATTGTAGAAGAAGTAATTGAAGAGGTAGTAGAAGAGCCTAAGACTGAGATTGAAGTTCTGGCTGACCAGGTTGCTGACCTTATCGCCAAGCCCGAAGAGAAAGTAGAAGTAACCGAGAGTCTTGAGAAAAAGGTTCAGATTATTGAGAGGAGTATTGGTGAGCTCCGTAACCTCACTATGGAGGTTGCCCATGGAACTTCTGTTTCCGGTCTGGGCTTTACTGCTGGTGGTGGTGAAGTTCGTCTCCAAGGTCTTGACGACGTTTCCTTCACTGAGTCTGCCCTACTGAACGGTCAGTCTCTGGTTTGGAGTGCCACTGAGGGTAAGTGGATTGCTGCCACTGTATCTGGCGGTGGTGGTGGTGGCGCCGTAGATAGCGTTAACGGTGAGTTTGGTGTTGTTGTTATTGACGCCGACGACGTTGACGACACCACAACGACAAATAAGTTTGCCACACAGGCTGAACTGGACTCTATCTCCACAGCTCTACAACCTGCTGATATTGGCGTAAGTGTCCAGGCTTTTGACGCAAACGTTGTCATTGACGCCAACTATGTTGCGACAGACGAGAACTTTACCACTGCCGACCACGCAAAGTTGGACGGTATTGCTGCCGGAGCAGAGGTCAATGTTCAGTCGGACTGGAACGCCACGAGTGGTGACGCTCTTATCCTGAATAAGCCCACGCTGTTCAGCGGTTCCTACAACGACCTAACAGACCAACCTACCCTATTCAGTGGTTCTTATACCGACCTCACAAACCAACCAACTCTGTTTAGTGGTTCCTATAACGACCTGACGGACCAGCCAACTCTGTTCAGTGGTGCCTATGCTGACCTGACCGGAACTCCAACTCTGTTCTCCGGTTCCTATAACGACCTGACGGATACTCCAACTATTCCGCCAGCTGCTCCTGTCGATAGTGTCAATACACAGACCGGAGCCGTTGTTCTGGACGCCGACGATATTGACGACACGACAACACTCCATAAGTTCGCCACCGCCGCACAGTTGAGTGCCGCTGATAGTGCTGTTCAGCCTGGTGACCTTGCCGCTGTTGCTACTTCTGGTGCTTACGGTGACCTTACGGGAACTCCTACTCTGTTCTCTGGTTCCTATAACGACCTGACGGACACTCCAACTATCCCCACCAATAATAACGAACTGACGAACGGTGCTGGGTATATCACAGGTTACACTGTAACCGAAGGTGACGTCACTGCTCATCAAGCTTCCCTGACTATTGCTCAAAGTCAAGTAACCAACTTGACCACTGACCTCGCCGCTAAGGCTGACCTGGTTGGTGGCGTTATTCCTAACAGCCAGCTCCCCTCTCTTGCTATTTCCGAGTATCTCGGAACGGTTTCTGACCAGACTGCTCTTCTGGCTCTTACCGGACAGCGTGGTGACTGGGCTATTCGCACAGACACCGGTTCTACTTGGGTTATTACTACCGACGGCGGTTCTACTATTACTGACTGGACGGAACTTGCTACTCCCGCCGACGCCGTAACTTCTGTCAATGGTTTCACTGGAACTGTGGTTCTGGGTGCCTCTGACGTCGGTGCTGCTACTGCCGCACAGGGTTCCACTGCTGATAGTGCTGTTCAGCCCGGCGATCTCGCTACTGTCGCCACCACTGGTGCTTATAGTGACCTGACTGGAGCCCCCACTGTTGTATCCGCTTTCACTAACGACGCTGGTTATATTACCAGTGCTGACGGTGGAGACGCTGCAACCTTGGATACTCTGGACTCAACTCAGTTCCTGAGGAGCGACACTGACGACACCATGGACGGCAACTTGACCGTCAACGGAGACGTAACCTTTACTGATACTGCCACGGACTCACTTGCTGGTCCTGAGTTCTCACTATACCGCAATAGTGCTTCCCCTACTGCTGGTGACTATCTGGGTCAGATTCGCTTTGACGGTAAAAACTCCAACGGTGGAGACCAACTCTATGCCAAGATCACGGGTAAGACTTCCGACGTAACTCTGGGTAGTGAAGACGGACTTATTGAGTATGCTGTTGTGAAGGCAGGAACCCAGACTATCGTTCAGCGTTTGACCGGCAGTGCTCTCAAACTTATCAACGGAACTTCACTAGAAGTCAATGGTGATATTACAACCGACGGAACACTATCGGCAGCGGGTATTGACATCGACTCTCTCCCAACGCTGCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cca6e441f3f89586e3e9b83d5a407f79dda60a0eb0244828c12f1f6d22fcc0cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank