Protein

View in Explore
Genbank accession
QHJ72621.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSQLNSIDTIRSEDLLHIRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMIGDLGIVKLLYGGKAVFDPTGSSEITIGDVLKTFKLNANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNTFSGTQNIQGDANLLRLRNQNANNAQYIEGVNLDGSARWWVGIGSNGSDEVKLYNNKYNSVLTVASNISVNKSLAITGQVQPSDFSNLDARYFTQTVANQRFAQLAANNNFTGTNTFSRNLLIISDSAALRLKNATSSSLFIQGVDSQNANRWYVGNGDNTASVLLHNYVHGSNIRLDNGYISVNQNFRITGQVQPSDWANIDSRYIPAATLNTIARTNAMNTFNGVQTVVSDNEGLVIRNSTQSKPLYIRGVDTANVSRWWIGIGGADSNNVTLSNSFSGTQISLESTLVSVNKNLYINGQVQPQDWTNIDGRYYNKSSADSRYLRIRSTGFNNVNGNKWAKIATVTMPQGTSTAVIELFGGAGFNYGIYNQACKTEIVLSTGNGKPKGLNVVAWKNAPNDVVGQVGYVNTSGDNYDIYCYVGGYQNATTARVQSSDNATVQLFASPETYDNAPDDYVAGTIAYYYTSLLKPTPTDIGAYTKAETDQKIAEAISDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLSVGNLPSHTHSFSATTSSFDYGTKTTNTTGNHAHDRGNMEISGVVGWFRSDNSAFYTASGAFQMGSSQASHGFTGSHFTYGAAADFRASRTWTGVTNTTGNHAHSVGIGSHNHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:849 AA
molecular weight: 91801,15660 Da
isoelectric point:8,41443
aromaticity:0,09541
hydropathy:-0,36466

Domains

Domains [InterPro]
DC_0032
ATT
1–266
DC_0032 G3DSA:6.20.80.10 G3DSA:6.20.80.10
G3DSA:6.20.80.10
STR
159–218
G3DSA:6.20.80.10 DC_1993 IPR048388
IPR048388
ATT
159–247
IPR048388 IPR048388 DC_2005
QHJ72621.1
1 849
Architecture
ATT
ATT
STR
ATT 1-360 | ATT 381-470 | STR 471-816 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHJ72621.1
1 849
Domain Start End Length (AA) Confidence
N-terminal 1 66 66 0,9864
Central domain 67 265 200 0,1722
C-terminal 266 849 583 0,7936
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-66
Central
67-265
C-terminal
266-849

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JN01
[NCBI] 		2692737 Uroviricota > Caudoviricetes > Andersonviridae > Felixounavirus > Felixounavirus JN01
Host Escherichia coli O157
[NCBI] 		1045010 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHJ72621.1 [NCBI]
Genbank nucleotide accession
MN882542.1 [NCBI]
CDS location
range 61831 -> 64380
strand +
CDS
ATGGCAGATTACAAATTGAGTCAATTAAACTCAATAGACACAATTCGTTCAGAAGACCTATTGCACATCAGAGTTAAGAAAAGACCTGAAATGTTGGGTGACGAAGACCGTAGAATGACCTATCAAGACTTCTTAGCTTCCTTCAAACTAGAAAGGTTTGTTCAGATTGCTGGGAGCACTATGATTGGGGATTTAGGTATTGTCAAGTTACTTTACGGTGGCAAGGCTGTATTTGACCCAACAGGCTCTTCTGAGATTACTATTGGGGATGTTTTAAAGACTTTTAAACTTAACGCAAATGGTCTTAAACTCACTATTGCAGATGCTTCAAGGTCAGCAACTGTTTATCATACTTTGAATAAACCAAGCCCTAATGAACTTGGTATGAGAACTAATGAAGAGAATGATGCAAGATATGCAAGGCTTGCTGTTACAAACACATTCTCTGGAACTCAGAATATTCAAGGTGATGCTAACTTACTTCGCCTTAGAAACCAAAATGCAAATAATGCACAATACATTGAAGGTGTAAACCTAGATGGTTCAGCTAGATGGTGGGTTGGTATTGGTAGTAATGGCTCTGACGAAGTAAAACTGTACAATAACAAATACAACTCAGTTTTGACTGTTGCAAGTAATATCTCTGTTAATAAGTCTTTAGCAATCACTGGACAAGTTCAACCTTCAGATTTCTCTAACTTAGATGCCAGATACTTTACTCAGACAGTTGCTAATCAGAGATTTGCACAGTTAGCTGCTAATAATAATTTTACTGGAACAAACACGTTTAGTAGAAACCTACTTATTATCAGTGATAGTGCTGCTTTAAGGTTGAAAAATGCAACATCTAGTTCCCTATTTATTCAGGGAGTTGACTCTCAGAATGCCAACAGATGGTATGTAGGGAATGGTGATAACACCGCCTCTGTGTTACTACACAACTATGTACATGGTTCAAATATTAGACTTGATAATGGGTATATCTCAGTAAACCAAAATTTCAGAATCACTGGTCAAGTCCAACCTTCAGATTGGGCTAATATTGACTCTAGATATATTCCGGCAGCAACTTTGAATACAATTGCAAGAACCAATGCAATGAATACTTTTAATGGTGTGCAGACAGTTGTTAGTGATAACGAAGGTCTAGTTATTAGAAACTCTACTCAGAGCAAGCCATTATATATTCGTGGTGTGGACACTGCTAATGTATCAAGATGGTGGATTGGTATTGGTGGTGCAGATAGTAATAACGTGACACTAAGTAACAGCTTTTCTGGGACTCAGATTTCTCTTGAGTCAACGTTAGTAAGTGTAAATAAGAATCTGTATATCAATGGTCAGGTTCAACCACAAGACTGGACTAATATTGATGGGAGATACTATAACAAATCATCTGCTGATAGCAGATACCTGAGAATCAGAAGCACTGGATTTAACAATGTTAATGGGAATAAATGGGCTAAGATTGCTACTGTCACCATGCCACAAGGAACATCAACAGCAGTAATTGAACTATTTGGTGGTGCTGGTTTCAACTATGGTATATATAACCAAGCCTGTAAAACAGAAATTGTTCTTAGTACAGGGAATGGTAAACCAAAAGGCTTAAATGTTGTTGCATGGAAAAACGCACCGAATGATGTTGTAGGCCAAGTTGGTTATGTTAATACCTCTGGTGATAATTATGACATTTATTGCTATGTTGGTGGTTATCAAAATGCTACGACAGCTAGGGTTCAGTCCTCAGATAATGCAACAGTACAACTGTTTGCATCCCCAGAGACATACGATAATGCTCCAGATGACTATGTTGCTGGGACAATTGCTTATTATTATACTAGTCTCTTGAAACCAACACCTACAGATATTGGTGCATACACTAAAGCTGAAACTGACCAGAAAATTGCAGAAGCAATTAGTGACTCTACAGACCTGAATAAAATCTACCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTAACCCTAATACAGCACTTCCTGGTCTAACTTGGACGTACCTGAATAATGGTGTTGGTAGAACTATTAGAATTGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGATTCTGTAACGCTATCTGTTGGTAACTTACCTTCACACACACATAGTTTCTCTGCTACCACTTCATCATTTGATTATGGTACTAAGACGACAAATACGACTGGCAACCATGCTCACGATAGAGGTAACATGGAAATTTCTGGTGTGGTTGGTTGGTTCAGAAGTGATAACAGTGCATTCTACACTGCGAGCGGTGCGTTTCAGATGGGTAGTTCTCAGGCTTCACATGGCTTCACAGGCTCTCACTTCACTTACGGTGCTGCTGCTGATTTCCGCGCGTCAAGAACTTGGACAGGTGTAACCAACACAACTGGCAACCACGCGCACAGCGTTGGCATTGGTTCTCACAACCACACAGTTAGCGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGCGTCACTAACCAGTTCTACAAGTTAATGGCTTGGGTAAGGACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3e3c89679303d58a2a9dff0dd79ddf51a475bce84c37d9ff06bede8d37cbf235
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2907
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and biological characterization of an alkali-resistant Escherichia coli phage Li,Y., Wu,G., Shu,M. and Zhong,C. 2021-02 — GenBank