Protein

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Genbank accession
XPN63007.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPHVVVTRDAAVVGVSTVDGQAGAVDLTGKYLQKTDAAATYQTKAEGASKDFVLDSIQPIMSGALFRADPWVVNDTPFRSTGANGVESVDMMKVTPDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIEDLPFAAIGSYVKDSKGRTVGVTRTGINSDIKQLTQKVTFTQPVTVPDAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVVSDGQLLNRADYPDLWAYAQLLSPIEDSLWLSDKFQRGRYSKGDGSTTFRVPDRNGVQEGSIRALYGRGDGGSSTTNGAIFDSAAPNITGGFEIVTNTTVLENADLEGAIFGARKGYKYAQLNTIELPSSGDIYPKQMRIDASRSSPIYGASYDEIMGRNFVGVWTIRAHGGFTAANTSWSVINSDADKPSSGTSVSGGSILSEYKIGTEVEGYASFRMVGTIGATYAARVTVFNKSSGANETFDFGSDGNLNIPGSLRTNEGDVIAKSQLISQGGRIVLIGNSNQSQSFVEFKSNNGYTVNSRVYSERDGELTISTSTAGANQKYFQFLKDGSATSSGGWIHSSDMRIKENIKPIENPLEKMKNIKGVSWKLRNGGKIGFGFIAQDVEVDFPDAVSISGDMEMEDGSVVKGVRSVDTYGVSAALHHEAILELMKQIEDLKKEIAELKSGK
Physico‐chemical
properties
protein length:694 AA
molecular weight: 74411,96380 Da
isoelectric point:5,39382
aromaticity:0,08357
hydropathy:-0,32579

Domains

Domains [InterPro]
DC_1514
STR
8–328
DC_1514 DC_1985
IPR030392
CHP
588–687
IPR030392
IPR030392
CHP
588–639
IPR030392 Coil
XPN63007.1
1 694
Architecture
STR
RBD
STR 8-328 | RBD 430-694
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN63007.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,5366
Central domain 113 311 200 0,2569
C-terminal 312 694 382 0,9054
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-311
C-terminal
312-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_PE006
[NCBI] 		3388329 Viruses >
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN63007.1 [NCBI]
Genbank nucleotide accession
PQ812250.1 [NCBI]
CDS location
range 18855 -> 20939
strand +
CDS
ATGCCTCATGTAGTTGTAACCAGAGATGCGGCTGTTGTCGGTGTTTCTACTGTAGATGGACAGGCTGGTGCTGTTGACCTTACTGGAAAGTATTTACAGAAAACCGATGCGGCTGCTACATACCAAACTAAAGCAGAAGGTGCATCTAAAGATTTTGTACTGGATTCAATTCAACCTATTATGTCTGGTGCTTTATTCAGAGCAGACCCTTGGGTTGTTAACGACACCCCATTCCGATCTACTGGAGCTAACGGTGTAGAATCAGTTGATATGATGAAAGTAACCCCTGATAACTCAATCAAGATTGGTAGTTATGCCTCTTCAGTTCAAGGTGTAGAGATTCATTCTGCTGGTCGTCTTCAGGTTGTTGACCAGAATGATTCTGGGGTAGAAACTAAGTATCCGGTTTATTCTAAACGTTATCGTCCTGAGATTGAGGATTTGCCTTTTGCTGCAATTGGTTCTTATGTTAAAGATTCTAAGGGTCGTACTGTTGGGGTTACTCGTACAGGGATTAACTCTGATATCAAACAACTTACCCAGAAGGTAACTTTCACTCAACCAGTTACCGTTCCTGATGCAGTTGGGGATTATGATGCAGTTACTTTGAGACAGCTTCGTAATAGTGGTGGCGGTTCTGGTGGTCCTACAATGAGTGGTATATCTAACTTCGGTATTGGTGATTTCCACTTACGTGACAGTCGAGCTTTTATTCCAGCTTTTGAAGTAGTGTCTGACGGACAGCTTTTGAACCGTGCTGACTATCCAGACCTTTGGGCATACGCTCAATTGCTGTCTCCTATTGAAGACTCTCTGTGGTTGTCTGATAAATTTCAACGTGGCAGATACTCAAAAGGTGATGGTTCTACTACATTTCGTGTTCCGGATAGGAATGGTGTTCAGGAAGGGTCTATTCGGGCTTTATATGGTAGAGGTGATGGTGGCTCTTCTACTACTAATGGAGCTATCTTTGATTCAGCTGCCCCTAACATAACAGGCGGTTTTGAAATCGTAACAAACACTACCGTACTTGAGAATGCTGATCTTGAAGGGGCAATATTTGGTGCGCGGAAAGGGTACAAATATGCCCAATTGAATACTATTGAACTTCCTTCTTCCGGTGATATATATCCCAAACAGATGCGGATTGACGCGTCACGTTCAAGCCCTATCTACGGGGCGTCCTATGACGAGATTATGGGTCGTAACTTTGTAGGTGTTTGGACTATTCGTGCTCATGGTGGATTCACAGCAGCTAACACTTCTTGGTCTGTTATTAACAGCGATGCAGATAAACCTAGCAGCGGAACTTCTGTAAGTGGTGGGTCAATTCTCTCCGAGTATAAAATAGGAACTGAAGTTGAAGGTTATGCGTCTTTTAGGATGGTGGGAACTATCGGTGCTACTTATGCTGCTCGTGTAACCGTTTTTAATAAGTCTTCAGGAGCCAACGAAACCTTCGATTTTGGAAGTGATGGAAACTTAAACATTCCGGGAAGTTTGCGTACTAACGAAGGTGACGTCATCGCTAAGAGTCAACTGATATCTCAAGGAGGTCGGATAGTTCTTATAGGTAATAGTAATCAAAGCCAATCTTTTGTTGAATTTAAGAGCAACAATGGTTATACTGTGAATTCAAGAGTTTATTCTGAGCGTGATGGCGAACTCACCATATCAACATCTACAGCTGGAGCTAATCAGAAATATTTTCAATTTCTTAAGGATGGTAGTGCTACAAGCTCTGGTGGCTGGATCCACTCTTCTGATATGAGAATTAAAGAGAATATTAAACCAATAGAAAACCCTCTGGAAAAGATGAAAAACATCAAAGGTGTTTCTTGGAAGCTTAGAAACGGGGGTAAGATTGGTTTTGGTTTCATAGCTCAAGATGTTGAAGTAGACTTCCCTGATGCGGTATCTATTTCTGGTGATATGGAGATGGAAGATGGGTCTGTAGTTAAGGGTGTAAGATCGGTTGATACTTATGGTGTTTCCGCCGCTTTACACCACGAAGCTATTCTTGAACTTATGAAACAGATCGAAGACCTTAAGAAAGAGATAGCAGAACTTAAATCTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d98e456d6b55e9c96b177efd58ed462c57dc8f808acd88c401ec38a6c191d330
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6525
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50