Protein

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Genbank accession
XOD41868.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSYFAGSYRQLLFGVSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVRLIADAMAATDANRLAYSLATFSGREVLLVVDTLAGTLTILDDATGAVLFTGTNSYLTAGTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRSGYLYVVAGAFSKQYRLSITNQVTGVTTSVDVTTPATEASQATGEYIITRLRTAAEANTTIGTAAGFAYYQDGAYLYVTAPVAIAVSTDSGSNFLRASNAASIRDAAELPAKLPAAANGFIIATGTAKNKTYFRWVDLERKWDEDASRGAQAELIDMPLQITYSAPDFSLDALSYERRASGDTTSNPALKFTEQGISGMTTMQGRLVLLAGEYVCMSASGNPLRWFRASVSTQSDDDPIEVAATAAVASPYEYAVAFNKDLVLFAKTHQGLVPGANLLTSRNATAAVVTGYSFQNSCSPVVAGRTVFFASPRSGPWSAVWEMLPSQYTDTQVEANDSTSHLPKYIAGPVRFLATSSTTNIVVVGTMNPRELVVHEYLWQGGEKVHAAWHKWSFPQDIAGAYFRGDRLILLFHVAGRVILGELFMQRLGDSQSTPGGFLDLYRVGVANADEEVAIPAFAADLYPEDSTFAYKLSGEFQSIGQRCGARRVDGATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNGVPITAERTQLHRLTWSLDSTGEVTFRVADQARGESTYTTTPLRLYSRDLGAGLPLAATATLDTPARVDMQTAQFSLETDDYYDMNITSLEYGFRYNQRYRRQ
Physico‐chemical
properties
protein length:777 AA
molecular weight: 84339,57510 Da
isoelectric point:5,52693
aromaticity:0,10039
hydropathy:-0,13269

Domains

Domains [InterPro]
IPR058003
TTP
1–776
IPR058003
DC_0058
STR
1–777
DC_0058
XOD41868.1
1 777
Architecture
STR
STR 1-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD41868.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9884
Central domain 143 341 200 0,0976
C-terminal 342 777 435 0,1998
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS14_1
[NCBI] 		3390389 Viruses > unclassified bacterial viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD41868.1 [NCBI]
Genbank nucleotide accession
PQ287643 [NCBI]
CDS location
range 28861 -> 31194
strand +
CDS
ATGAGCTACTTTGCTGGATCGTACCGGCAGCTCCTGTTCGGCGTAAGTCAACAGACTGCCAAGGATCGCCTTGAGGGGCAGGTCGAGTCGCAGTTGAACATGCAAAGTGACCTGGTGACAGGTCCTCGCCGCCGTAGCCCGGTGCGCTTGATTGCCGATGCCATGGCCGCTACCGATGCCAACCGCCTCGCGTACTCTCTCGCCACATTCTCGGGGCGGGAGGTGCTGCTGGTGGTGGACACACTGGCCGGGACGCTGACTATCCTCGATGATGCAACTGGCGCAGTCCTGTTCACAGGGACAAACAGCTACCTTACCGCAGGTACAGGGAGAAGCATCCGATTCGCTGCACTAGACGACAGCGTGTTCGTGGCGAATACTGAGGTTATCCCGCAAACGCAGCTATGGTCTGGTGCGAGTGCGTACCCGGACCCAACCCGTTCGGGCTACCTGTATGTAGTCGCCGGGGCGTTCTCGAAGCAGTACCGCCTATCCATCACCAACCAGGTCACGGGGGTCACGACCTCTGTGGACGTGACCACCCCTGCAACAGAGGCCAGCCAAGCTACGGGCGAGTATATAATCACGCGGCTCCGCACGGCGGCAGAGGCAAATACGACCATTGGCACTGCCGCTGGTTTTGCGTACTACCAGGACGGTGCGTACCTGTACGTTACGGCGCCAGTGGCAATCGCGGTGAGTACCGACTCTGGCAGCAACTTCCTCCGGGCGAGTAATGCCGCCAGTATCCGGGACGCCGCCGAGCTGCCTGCGAAGTTGCCTGCTGCTGCGAATGGGTTCATCATCGCTACCGGTACTGCTAAGAACAAGACGTACTTCCGCTGGGTTGATCTTGAACGGAAGTGGGACGAGGACGCATCTCGGGGTGCGCAAGCTGAGCTGATCGACATGCCGCTACAGATCACGTACTCGGCCCCGGACTTCAGCCTGGATGCCCTGAGTTACGAACGCCGCGCCTCTGGGGACACTACATCGAACCCTGCCTTGAAGTTCACCGAGCAGGGTATCTCTGGGATGACGACCATGCAGGGGCGGTTGGTTCTGCTGGCTGGCGAGTACGTGTGCATGTCCGCAAGCGGGAATCCGCTGCGTTGGTTCAGGGCGAGTGTCAGTACACAGTCTGACGACGACCCTATAGAGGTCGCGGCTACCGCAGCAGTGGCCTCCCCGTATGAGTACGCCGTGGCCTTCAACAAAGACCTTGTGCTCTTCGCCAAGACCCACCAGGGCCTGGTGCCGGGAGCGAACCTACTCACGAGTCGCAACGCCACAGCGGCGGTCGTCACAGGGTACAGCTTCCAGAACTCCTGCTCGCCTGTGGTCGCTGGGCGCACAGTGTTCTTTGCCAGTCCCCGTAGCGGTCCATGGAGCGCGGTGTGGGAGATGCTGCCAAGCCAGTACACGGATACTCAGGTGGAAGCGAACGACAGCACGTCGCACCTGCCGAAGTACATTGCGGGGCCTGTGCGCTTCCTGGCGACCTCCAGTACCACGAACATCGTGGTCGTGGGGACGATGAATCCCCGCGAGCTGGTGGTGCACGAGTACCTCTGGCAAGGTGGGGAGAAGGTTCACGCCGCGTGGCATAAGTGGAGCTTCCCGCAGGACATCGCGGGTGCGTACTTCCGGGGCGACCGCCTCATCCTGCTGTTCCATGTTGCGGGTCGGGTCATCCTCGGCGAGCTGTTCATGCAGCGTCTTGGGGACTCCCAGAGCACCCCTGGCGGATTCCTGGACCTGTACCGTGTCGGGGTGGCCAACGCGGACGAGGAGGTGGCCATCCCAGCGTTTGCTGCGGACCTGTACCCGGAGGATAGCACCTTCGCGTACAAGCTCTCGGGCGAGTTCCAGTCCATCGGCCAGCGCTGTGGGGCTCGCCGGGTAGATGGGGCCACGGTGTACATCAAGGTCGTTGGGGCGCAGGCAGGGGACCAGTACCGAATCGGCCTACGCTACCTCTCGAAACTTGGGCCAACCCGCCCCATCCTACGGGACCCCAATGGCGTACCGATCACTGCAGAGCGCACGCAGTTGCACCGCCTCACATGGTCACTGGACAGTACCGGGGAGGTGACGTTCCGCGTGGCTGATCAAGCCCGAGGAGAGTCCACGTACACAACCACGCCCCTTCGACTGTACAGCCGTGACTTGGGTGCAGGTTTGCCCCTAGCAGCAACGGCAACCCTCGACACCCCTGCCAGGGTGGATATGCAGACGGCGCAGTTCTCCTTGGAGACTGACGACTACTACGACATGAACATTACCAGCCTGGAGTACGGGTTCCGGTACAACCAGCGCTATAGGAGGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b492a99fdc9e1099f27c8056cefa7897618c33ec6447f98213bc5f841ef72efe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3222
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50