Protein
View in Explore- Genbank accession
- WLY86434.1 [GenBank]
- Protein name
- long-tail fiber protein
- RBP type
-
TFTSPTF
- Protein sequence
-
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTKSQGFQKEVEFREGVKISATFSGGSDLNGLYSGNGDGASREKANMDLRSWYGIGIWNTCTGDGIQGRTIWFNARRGTVETVGDIVSDRQVISNASGPTGPAHLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
- Physico‐chemical
properties -
protein length: 229 AA molecular weight: 24692,85600 Da isoelectric point: 6,29091 aromaticity: 0,10044 hydropathy: -0,53013
Domains
Domains [InterPro]
DC_0466
STR
1–227
STR
1–227
IPR005601
STR
87–203
STR
87–203
1
229
Architecture
STR 1-227 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
229
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 55 | 55 | 0,9517 |
| Central domain | 56 | 218 | 164 | 0,0845 |
| C-terminal | 219 | 229 | 10 | 0,9308 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-55
1-55
Central
56-218
56-218
C-terminal
219-229
219-229
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage 310Ecol104PP [NCBI] |
3070624 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WLY86434.1
[NCBI]
Genbank nucleotide accession
OR062946.1
[NCBI]
CDS location
range 137572 -> 138261
strand +
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACTGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAACGGTGGCACAAAGTCTCAGGGTTTCCAAAAAGAAGTAGAATTTAGAGAAGGCGTTAAGATTTCTGCAACGTTTTCTGGCGGTTCAGACCTGAACGGGTTATATTCTGGCAATGGAGATGGAGCTTCCAGAGAAAAAGCTAACATGGATTTACGTTCATGGTACGGCATTGGTATTTGGAACACATGTACGGGTGATGGGATCCAGGGACGCACAATCTGGTTTAATGCCAGGCGTGGTACAGTTGAAACAGTTGGCGATATTGTTTCAGACCGACAAGTTATTTCTAATGCTTCAGGACCGACCGGCCCAGCACACTTAACTCGTAAAGATTATGTTGATGGAGCAATAAATACTGTTACAGCAAATGCGAACTCTAGAGTGCTACGGTCTGGTGACACCATGACAGGTAATTTAACAGCGCCAAACTTTTTCTCGCAGAATCCTGCATCTCAACCTTCACATGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTACAAGATTTCGGCTATTATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
14d8dbbfa8e6859a57677377b1eaa5187924706e5f3fb6ad9bdc44403c3f22ec
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50