Protein

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Genbank accession
QAX92342.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIPNLVGFIWNGASDRTFSVQAPGMQSLEIDALLSEVPSFKKNVTQYEVEEGKPVTDSVRKMPITLSLECFVSNSPIRSLLDTAASFADGLLGGGQRNQEIYNLLLQLYEYDDEITVYTRYKTFEHMVITDITPARKPEDGDALIFTMELQEIRKAISSTTEVPKGMGVKPDTGKSSATDKATAQRAGVTKNAGQNTGVAGAAGSDSPTLLYQVTQGIKDFKIPGWN
Physico‐chemical
properties
protein length:228 AA
molecular weight: 24775,71770 Da
isoelectric point:4,93655
aromaticity:0,07456
hydropathy:-0,28070

Domains

Domains [InterPro]
DC_0628
STR
13–223
DC_0628
IPR048494
ATT
32–165
IPR048494
QAX92342.1
1 228
Architecture
STR
ATT
STR
STR 13-31 | ATT 32-165 | STR 166-223 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_LIET2
[NCBI] 		2508071 Uroviricota > Caudoviricetes > Lietduovirus >
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX92342.1 [NCBI]
Genbank nucleotide accession
MK388689 [NCBI]
CDS location
range 46999 -> 47685
strand +
CDS
ATGGCTATCCCAAATCTTGTGGGCTTCATCTGGAATGGTGCTTCAGACCGCACGTTTTCAGTTCAGGCCCCCGGCATGCAGTCACTTGAAATCGATGCGTTACTAAGCGAAGTGCCCAGCTTCAAAAAAAACGTGACGCAATACGAAGTGGAAGAAGGCAAGCCGGTGACAGACAGCGTGCGCAAGATGCCGATCACCCTGTCGCTGGAATGCTTCGTATCAAACAGCCCGATCCGCTCGCTGCTGGACACCGCAGCATCATTCGCTGATGGCCTTCTGGGTGGCGGACAGCGCAATCAGGAAATTTATAATCTCCTGTTGCAGCTGTATGAGTATGACGACGAAATCACGGTTTACACCCGTTACAAGACGTTTGAACACATGGTGATTACCGACATCACCCCCGCGCGAAAACCAGAAGATGGTGATGCCCTGATTTTCACAATGGAACTTCAGGAGATCAGGAAGGCGATCAGCAGCACAACCGAAGTTCCGAAAGGAATGGGCGTGAAGCCGGACACCGGGAAATCATCAGCGACTGATAAAGCGACTGCCCAGCGCGCTGGCGTGACCAAAAATGCCGGGCAGAATACCGGCGTTGCTGGTGCTGCCGGTAGTGATTCGCCGACCCTGCTCTATCAGGTTACGCAGGGCATCAAAGACTTCAAAATCCCAGGGTGGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b16547af812f624b2c3defbf0b6760fe768aee9df50d802be9692877877b9c67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7702
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagM_LIET2 Truncaite,L., Simoliuniene,M., Kazlauskas,D., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank