Protein

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Genbank accession
QVJ07754.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MMQKMVLNRIYQKDCTIGVLTLGKFRCFTLELPDLNNASNISCIPEGTYKVTKHKSPSQGDCFKIHDVVNRSNILIHVGNYTSDIQGCILVGDKIADINGDGIPDVTNSNRTLRELLAISSDEFLIKVG
Physico‐chemical
properties
protein length:129 AA
molecular weight: 14271,31350 Da
isoelectric point:6,80308
aromaticity:0,05426
hydropathy:-0,08605

Domains

Domains [InterPro]
IPR043732
STR
7–119
IPR043732
QVJ07754.1
1 129
Architecture
STR
STR 7-119 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_VA-RY-3
[NCBI] 		2831177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ07754.1 [NCBI]
Genbank nucleotide accession
MW900438.1 [NCBI]
CDS location
range 34319 -> 34708
strand -
CDS
ATGATGCAGAAAATGGTTCTTAACCGAATCTACCAGAAGGATTGCACAATAGGTGTTTTAACATTAGGAAAGTTTCGATGCTTTACACTTGAGCTTCCTGATTTGAATAATGCCAGCAATATATCTTGCATTCCAGAAGGCACGTATAAAGTAACTAAGCACAAGTCGCCATCACAAGGTGATTGCTTTAAGATTCACGACGTTGTAAATCGTTCCAATATCCTTATTCATGTCGGAAACTATACCAGCGACATTCAAGGTTGTATTCTGGTAGGTGACAAGATAGCGGATATTAACGGGGACGGAATACCGGACGTAACTAACTCTAATCGTACGCTAAGAGAGCTACTCGCTATCTCTAGCGACGAGTTTTTAATTAAGGTGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e5037e982737367697759add620270486ae47df2dc962ff09305af51b6f3d01
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9697
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence analysis of Vibrio alginolyticus lytic phage vB_ValP_VA-RY-3 Ren,Y., Xu,Y. and Wang,L. 2021-04-02 — GenBank