Protein

View in Explore
Genbank accession
QVJ12477.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNTENFDAAMNDRSSVSWVDRFGVSRKSWFGIEQQVNDYLASQGFEPGVLEYVDGSPLTVDRPTQLIQRGDNLYSVKRPASFPVNLSGNWATDQLLLVTQVDRDLRSQLAASDGGSNIGFRSRTVDAKLNELISLADFGAVADYSGTPEYDGNDGSRITATDNTAAFSALIAEAISRGDACVHIPAGHWGIKTGQLNFSNFEKIRIVGDGIDTTIIDFIHEYAPVTGGGYVTNDIAHAIAKFSSGDSIEFSNLTIKGTTKKGLVTGTPGSNWTYEGAVWGFILQNVNRIRLDRVRVEHFNYRGFSMYGPETKEVIINECEGFYNVGSGFWVEDTDSLLVTGGEFAYNGISGEVGTGYGVTGSTRVGNMVVSGGYYHHNYRKGLDTHGVHHFRLLGGLFQANIYSHCDVLRYATDPTGCTTQIKGTTFTSGVDTDEQAWILAEYNLRKTNGYKFAGGHVFRVVDNSPGKSVSVHVSEIAVRGHYAPQRTVGFTEGGPVPFQFSTTLGRMSWIGNEIDLTGYEFSASGTFGTHCLFDGLAAEFEFKDGLLNCPADGAFTNTTTSLSDKSNVFILQGVSTYTSRVSFDNWRMRVNNLYLSSAASSVGTGATRQAINWENTGRIVTNCSFGWASEPYTALAPLERFNNLHFLGAWKAGPLNPSLSYLRNNYVITGGRTYSLPDDSLAVLNSRKPYSFPNVTKALGAQVFSIVMDKQSGSLVKISTGLSGEELNISVYSGDFTGISGSGSNPYLEFDSADPNYLVNGVAKLRLNVKAKIALNNINLFGEIWAYGRYPSLGIEYVFAT
Physico‐chemical
properties
protein length:821 AA
molecular weight: 89325,19890 Da
isoelectric point:5,46850
aromaticity:0,11571
hydropathy:-0,22400

Domains

Domains [InterPro]
DC_1559
ATT
1–173
DC_1559 IPR011050 DC_1685
IPR012334
STR
152–484
IPR012334
QVJ12477.1
1 821
Architecture
ATT
STR
RBD
ATT 1-173 | STR 174-484 | RBD 485-821
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVJ12477.1
1 821
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9953
Central domain 161 672 513 0,9890
C-terminal 673 821 148 0,9775
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-672
C-terminal
673-821

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA04
[NCBI] 		2833427 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12477.1 [NCBI]
Genbank nucleotide accession
MZ089728 [NCBI]
CDS location
range 30021 -> 32486
strand +
CDS
ATGACGACCTACGCCACCGGTAACCCGCTGGGCTCCAAAGACCCGCGCGATCTGTACGACAACACCGAGAACTTCGACGCGGCGATGAACGATCGTTCGAGCGTCTCTTGGGTGGACCGCTTTGGTGTTTCCCGAAAGTCGTGGTTTGGAATAGAGCAGCAGGTCAACGACTACCTTGCCTCTCAGGGCTTCGAGCCAGGCGTACTGGAGTACGTAGATGGCTCTCCGCTGACTGTAGATCGTCCGACCCAACTGATCCAGCGCGGGGATAATCTTTACAGCGTCAAGCGTCCGGCATCATTCCCTGTGAACCTCAGCGGAAACTGGGCAACTGATCAGTTGTTGCTTGTTACACAGGTAGATAGAGACCTTCGTTCGCAACTTGCTGCATCAGATGGCGGTTCGAATATCGGTTTCCGTAGCAGAACTGTAGACGCAAAGCTGAATGAGCTTATTTCGTTGGCAGACTTCGGGGCAGTTGCTGATTATTCTGGAACTCCCGAGTATGACGGAAACGACGGATCCAGAATCACCGCAACCGACAACACGGCTGCGTTTTCCGCATTGATCGCTGAGGCAATCAGTCGTGGCGATGCCTGTGTCCATATTCCGGCTGGCCATTGGGGTATCAAGACTGGTCAACTTAACTTCAGCAATTTCGAGAAAATTAGAATCGTTGGTGATGGTATTGACACAACCATCATTGACTTTATTCATGAGTACGCGCCAGTAACTGGTGGTGGGTATGTTACTAACGACATTGCCCATGCTATTGCGAAGTTCTCGTCTGGAGATAGTATTGAATTCTCAAACCTGACCATCAAGGGCACGACCAAGAAAGGGCTTGTGACCGGCACTCCAGGCTCAAACTGGACGTATGAGGGTGCTGTGTGGGGATTTATCCTGCAAAACGTGAATCGCATTCGGCTTGATCGTGTTCGCGTAGAGCACTTCAACTATCGTGGATTCTCGATGTATGGCCCTGAGACTAAAGAGGTAATCATCAACGAGTGCGAAGGGTTCTACAACGTAGGTTCAGGTTTCTGGGTCGAAGATACTGACTCCCTTCTGGTAACTGGCGGAGAGTTTGCATACAACGGCATCTCAGGCGAGGTCGGAACTGGCTACGGAGTAACTGGCTCTACTCGCGTTGGAAACATGGTTGTGAGTGGCGGTTACTACCACCACAACTACCGTAAGGGGCTGGATACACACGGCGTACATCATTTCCGTCTTCTTGGCGGACTGTTCCAGGCAAATATATACAGTCATTGCGACGTTCTTCGGTACGCAACTGATCCAACCGGCTGCACGACGCAAATTAAGGGAACTACCTTTACTTCCGGCGTTGATACTGACGAACAAGCCTGGATTCTCGCAGAGTACAACCTGCGCAAAACAAATGGGTACAAATTTGCAGGCGGCCATGTTTTTCGAGTCGTCGACAACTCACCCGGAAAGAGTGTCTCGGTTCATGTGAGCGAAATCGCTGTTCGTGGGCACTACGCTCCGCAGCGTACCGTTGGGTTCACCGAGGGTGGCCCGGTCCCGTTCCAGTTCTCCACGACGCTCGGTCGCATGTCGTGGATTGGAAATGAGATCGATCTGACTGGATATGAGTTCTCGGCCTCTGGAACCTTTGGAACGCACTGTCTATTTGATGGCCTGGCCGCCGAATTCGAGTTCAAGGATGGACTGCTTAACTGTCCGGCTGATGGTGCGTTCACAAACACGACTACCAGCTTGTCCGACAAGAGCAACGTGTTCATTCTTCAAGGGGTTTCTACCTACACCTCTCGGGTATCGTTCGATAATTGGAGGATGCGTGTTAATAACCTTTACTTGTCGTCAGCAGCTTCCTCTGTGGGTACGGGAGCTACTCGGCAGGCTATCAACTGGGAGAACACAGGCAGAATCGTAACGAACTGTTCCTTCGGGTGGGCTTCTGAGCCGTATACAGCGCTGGCGCCACTTGAGAGATTCAACAACTTGCATTTCCTGGGAGCGTGGAAAGCAGGGCCTTTGAACCCATCTCTCTCATACCTTCGTAATAACTACGTTATTACCGGAGGTCGAACCTATTCCCTTCCTGATGATAGCCTGGCTGTATTGAACAGCCGCAAGCCTTACTCGTTCCCCAATGTGACTAAAGCGCTTGGTGCTCAGGTGTTCTCTATTGTGATGGATAAACAGTCTGGAAGCTTGGTCAAAATTTCTACAGGACTGAGCGGAGAGGAACTGAACATTTCCGTCTACAGCGGAGACTTCACGGGTATTTCCGGATCTGGTTCTAACCCATATCTTGAGTTCGATTCTGCTGACCCGAACTACCTAGTGAATGGAGTAGCCAAGCTGCGTCTGAACGTAAAAGCCAAGATCGCTTTAAATAACATAAATCTGTTTGGGGAGATTTGGGCGTATGGTCGATATCCGTCGCTCGGTATCGAATACGTTTTTGCAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
14c843c8ec8f5569ca1f7aebead9d986cd4873c537795a9ae2e118ecfa50e49b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2872
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank