Protein

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Genbank accession
YBB95847.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNSHNPFNTGGSGCTNDFRSADQLVDRIIGDAYHVVKEVYLALGNLTYIYNYLQKYGLIITVDSEEALKDIPLSIGKFARVYNKSEDFGYYFTDYLYVNDDQSGILPNEPDAAGSWLSASSTGSNASFVKIWKYVAPEDGITLINLPTNTPIVDVQTIYVQGVRQDVNDGFTYNKEHKSILLADELEEGNSVTVIIGISDPDLDIDILSVLSGRDGASGIGTKDGRTVQEYLDDLLEGQQYFSINTRSLWERFLLEYGYVLNAGSFQDGATVTSSGSALLDLASGNCYLWKGNLPYAVPPKSSPSSTGGISSTTWEKVTTTLRSQLAGVNGTNMITHSDGNTVRTHLERFYKTFTGVIQAPTWATVQGSNALKFSAGLFSFAGQPLVGQDKTVSVTGSTVCIVITSSGNYEARDRIPFDGSILVAHVRSGSVVEVVGDMNRSAYGFAGTPASIPWLPVELRRIEEKIPINITINSDGTLSYSTDYDVSIKKAGGLTYYVDCTNGSDTTGDGTIDKPFQRIKFAIEKTPLARTIMVKGGMTYTRDFTWNVSVVDRDLDVIGYSGKPVLTTIEPNPVWTPQGSPGIYQYTGNLVLNVADYANIGAYGQPQVLTPVATLAECVAKAGSSYLTGSTLYIHLFDGRVPDSNAKLVMQITNGRMQDNCKVYLENLDFGASFRGFQAEVRDASKQGYFYAKNCNFGLTVTANSYNSLGVHTILQDCTGSFGMQDIANYHSDTLGLGKKPWFIEINCKFGNGGFDGLPNNNASTAHDGAVGIRIGGEYFATYGRVVHDVHDGTVTANFGCYSHDSSRSDYLGGACFTAGQGSDPTGKAKVYLYGCRHSGPNAAITKDGQSEVWLFDTPMGVNTQYNSVTPYKFVQ
Physico‐chemical
properties
protein length:877 AA
molecular weight: 95062,90110 Da
isoelectric point:5,04301
aromaticity:0,10718
hydropathy:-0,20388

Domains

Domains [InterPro]
DC_0519
STR
119–315
DC_0519 IPR012334
G3DSA:2.10.10.80
ATT
258–328
G3DSA:2.10.10.80 DC_1219
IPR040775
RBD
259–319
IPR040775
DC_2121
ATT
265–590
DC_2121
YBB95847.1
1 877
Architecture
STR
ATT
STR
STR 119-257 | ATT 258-590 | STR 591-867 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YBB95847.1
1 877
Domain Start End Length (AA) Confidence
N-terminal 1 516 516 0,9720
Central domain 517 866 351 0,9800
C-terminal 867 877 10 0,2883
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-516
Central
517-866
C-terminal
867-877

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Skif1059
[NCBI] 		3458633 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YBB95847.1 [NCBI]
Genbank nucleotide accession
PX093639.1 [NCBI]
CDS location
range 66508 -> 69141
strand -
CDS
ATGAATTCTCATAACCCGTTTAACACAGGTGGTAGTGGGTGCACCAATGATTTTCGTTCTGCTGACCAGTTAGTAGACCGTATCATTGGTGATGCCTACCATGTAGTAAAAGAGGTATACCTTGCTTTAGGTAACCTTACCTACATCTATAACTACCTGCAAAAGTACGGTTTGATTATTACTGTAGATAGTGAAGAAGCTCTTAAAGACATTCCGTTATCAATCGGTAAGTTTGCTCGTGTATACAATAAGTCGGAAGACTTCGGTTACTACTTCACAGACTATTTGTATGTTAATGATGACCAGAGTGGAATCCTGCCAAATGAACCGGATGCAGCAGGCTCCTGGCTTAGTGCAAGCTCTACTGGTTCTAATGCATCTTTTGTTAAAATTTGGAAGTATGTTGCACCAGAAGATGGGATTACACTCATCAATCTACCCACAAATACTCCAATCGTAGATGTACAAACTATTTACGTGCAGGGTGTACGTCAGGATGTGAACGACGGGTTTACTTATAACAAAGAGCATAAGTCTATTCTTCTTGCTGATGAGCTAGAAGAGGGTAACTCTGTCACAGTTATTATTGGTATTAGTGACCCAGATTTGGACATAGATATCTTATCTGTGCTCAGTGGAAGAGATGGTGCATCTGGCATTGGTACTAAAGATGGGCGTACTGTACAAGAGTATCTTGACGACTTACTCGAAGGTCAGCAGTATTTCTCTATTAATACTCGTAGCCTTTGGGAAAGATTCCTACTGGAATACGGGTATGTACTGAATGCTGGCAGTTTTCAGGATGGTGCTACTGTTACTAGTAGTGGCTCTGCCCTGTTAGACCTAGCATCTGGTAACTGTTATTTATGGAAGGGTAACCTGCCTTACGCAGTTCCTCCTAAATCAAGTCCATCCAGCACAGGTGGGATTAGTTCCACTACATGGGAAAAGGTAACCACAACCCTACGTAGTCAATTGGCTGGAGTTAATGGAACCAATATGATTACGCACAGTGATGGTAATACGGTACGGACTCACTTAGAACGTTTTTACAAAACTTTTACTGGTGTAATCCAAGCACCTACGTGGGCTACTGTACAGGGTAGCAATGCATTAAAATTCTCAGCTGGTCTGTTCTCATTTGCTGGGCAACCACTGGTAGGCCAAGATAAAACCGTTAGCGTTACTGGTTCCACTGTATGCATTGTAATTACCTCTAGCGGTAATTACGAAGCCAGGGACCGTATTCCTTTTGACGGCTCAATCCTGGTTGCACATGTTCGCTCTGGTTCTGTTGTAGAAGTAGTTGGTGATATGAACCGTAGTGCGTATGGTTTTGCTGGCACTCCTGCATCTATTCCATGGTTACCTGTAGAGTTACGCCGGATTGAGGAAAAGATTCCAATTAATATCACTATCAACTCTGATGGTACCTTGTCCTACAGCACAGACTATGATGTTAGCATTAAGAAGGCTGGTGGTCTTACCTACTACGTGGACTGCACTAATGGTAGCGATACTACTGGGGATGGTACTATTGATAAACCATTCCAGCGTATTAAGTTTGCCATAGAGAAAACTCCCCTTGCCCGTACCATTATGGTTAAGGGTGGTATGACTTACACTCGTGATTTTACGTGGAATGTGTCTGTAGTAGACCGTGACCTTGACGTTATCGGTTATAGCGGCAAACCTGTGCTTACTACTATAGAACCAAATCCGGTATGGACACCTCAAGGTAGCCCAGGCATTTATCAGTATACTGGTAACTTGGTTCTTAACGTGGCTGACTACGCTAATATTGGTGCTTATGGGCAACCGCAGGTACTTACCCCTGTGGCAACATTAGCAGAGTGTGTAGCTAAAGCAGGTTCCTCCTACCTAACTGGAAGTACATTATATATCCACCTGTTTGATGGTAGGGTACCAGATTCAAATGCAAAGTTGGTTATGCAAATCACCAATGGCAGAATGCAGGATAACTGCAAAGTTTATCTTGAGAACCTTGATTTTGGTGCATCATTCCGGGGATTCCAGGCAGAAGTACGTGATGCCAGCAAACAAGGGTATTTTTACGCTAAAAACTGTAACTTTGGTTTAACAGTTACAGCTAATTCGTACAATAGTCTGGGCGTCCATACAATCCTACAGGACTGTACTGGTAGCTTTGGTATGCAGGACATTGCCAACTATCACTCAGATACTCTTGGACTGGGTAAGAAACCTTGGTTCATTGAGATTAACTGCAAGTTCGGCAACGGTGGATTCGATGGTCTGCCTAACAACAATGCTTCCACTGCCCATGATGGGGCAGTAGGTATACGAATTGGTGGGGAGTACTTCGCTACTTATGGTAGAGTTGTCCACGATGTTCATGACGGTACGGTAACCGCTAACTTTGGTTGCTATTCTCATGACAGTAGTAGGAGCGATTATCTGGGGGGTGCCTGCTTCACAGCAGGGCAGGGTTCAGACCCTACTGGTAAAGCTAAAGTATATCTATACGGATGCAGGCATAGTGGTCCTAACGCTGCTATTACCAAGGATGGCCAAAGTGAGGTGTGGTTGTTTGACACACCTATGGGTGTGAACACCCAATATAATTCAGTCACTCCTTACAAATTTGTTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ace5f4f7be97b775e46664fe7c8d0f3afb6100706bbf51d6c0c6efa8743e008
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50