Protein

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Genbank accession
YP_009787601.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYTGDYTAPAAGSTSGNAAEASGAYVAQQLRDSLVANGLPSGSVSVRGAYLFFYGLSNCVVSSDAGDTYAGVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFSYSTRTWSEVGAYGSITKITNMPRELAADDNVIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQDGVFTVPAVLRPVGWADNYKEELILTYLPSDAMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVTLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85874,11590 Da
isoelectric point:5,05454
aromaticity:0,08651
hydropathy:-0,24924

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
YP_009787601.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009787601.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9928
Central domain 146 344 200 0,1225
C-terminal 345 786 441 0,1069
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-344
C-terminal
345-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_KpV48
[NCBI] 		1912319 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009787601.1 [NCBI]
Genbank nucleotide accession
NC_047783 [NCBI]
CDS location
range 27378 -> 29738
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATTCAGAGCCTGCTGCAGGGTGTCTCCCAGCAGGTTCCTAGAGAGCGCCAGCCCGGGCAGCTGGGGGCGCAGCTGAATATGCTCAGCGACCCGGTTTCCGGTATCCGCCGTAGACCGCCGGGTGAGATTGTCTGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACGGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTTGTTACCACCGTAGGTCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGGCTCCGAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACCGTTACCTCTGCTGGAGTGGACTACACTGGGGACTACACCGCACCAGCTGCCGGTAGCACCAGCGGCAATGCTGCGGAGGCATCAGGTGCCTACGTTGCCCAGCAGCTGCGGGACTCTCTTGTAGCGAACGGGCTGCCCTCCGGGAGCGTGAGCGTACGCGGAGCGTACTTGTTCTTCTATGGGTTGAGCAACTGTGTAGTGTCCTCTGACGCTGGCGACACTTACGCTGGGGTTTCTAACCAGTCTCGCGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAAGCTGACGGAGCAATGTGCCGTGTAGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAGCTACAGCACCCGTACCTGGTCTGAGGTGGGGGCGTACGGCAGCATCACCAAGATTACGAACATGCCCAGAGAGCTCGCCGCGGACGACAACGTCATTGCGCGGGATTGGGAGGGGCGCTTAGCGGGCAACGACGATAACAATAGTAATCCAGGTTTCGTCGAGAATGGTTATATCACTGGTATTGCAGCTTTCCAGGGCCGCCTGGTCCTGCTTAGTGGTAGCTCCGTGGATATGTCAGCCTCTGGTCTGTATCAGCGCTTCTACCGCTCTACTGTGACGTCCTTGCTGGATACAGACCGCATCAGCATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGTACCGCCGTGCAGTTCAACCGGGACCTGGTCCTGTTCGCTAACAGCATGCAGGCTGTTGTGCCGGGCTCTGCAGTGCTTACACCTACCAACGCAAGCATCAGCATCACCAGCACCTATGATTGTGACAGCCGTGTGACTCCGGTAATGGCGGGGCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCCGGTATTCTGGAGTTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACTGTGCACCTGCCGCGGTATATCCCCGGTAGGGTGTTGCAGATGCAAAACTCCAGCGTCACCAATATGGCCTTCTCACGCATGTCTGGAGAGCGTAATAGCTTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGATGGCGCTAAGATGCAGGCGGCGTGGCATAAATGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGACGAGGTGTTCTTGTACATGCAGGGGCCCAGTCCCAGCAACAAGCTTTTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAGTACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTACAGGACGGGGTGTTTACTGTTCCGGCGGTACTGCGCCCAGTTGGGTGGGCTGACAATTACAAGGAAGAGCTTATCCTAACGTACCTACCCAGCGACGCTATGGGGCCTACCGAGGTTGGCATCAAGGAGATTGCTGGGGAGAACACCCTGCGGGTTGTGCGCGGCGTACCTGATGGCACCTACGTAATCGGGCGACGTTACCGCAGTACGTTCACGTTAACTACGCCTATTCTGCGGGACCAGAATGACAAGCTCGTGGGAAGCGGGCACGTGCGCCTGCTGCGCCTGGATGTAGCGGTACGCAACTCTGGGCACTTTGATGTGCAGGTACTAGATACCCCACGAGACGTCAACTGGGGCGGGGAGCTAACTGGTATCCTGATGAACTCGAAGGAGCTGACGCTCGGGCAGGCTCTGCGCATGGACCTGGCTACAATTACCGTGCCGTGCCGTACTAACGCAGACACAACCGAGGTGACGCTGTTTACTGAGGGTTCTATGGAACTGAACGTGCTGGATATCTCTTATATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d017b44561b61f5ff9816a14e2dfd7bce4c055e204d29aaf24fae404eb6126d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8821
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_KpnP_KpV48 lytic for Klebsiella pneumoniae Komisarova,E.V., Krasilnikova,V.M., Kislichkina,A.A., Myakinina,V.P. and Volozhantsev,N.V. 2017-09-14 — GenBank