Protein

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Genbank accession
XYL02904.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTKDQKIQVRETLKAILSNGESQVVFEKADGTIRSMRCTRDSDSIPSDLVESTVKPARAESIDMLPVYDTEKEQWRGFSFEKLISVNGVKVEHLIQLITH
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11592,14650 Da
isoelectric point:6,10516
aromaticity:0,04902
hydropathy:-0,41667

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
XYL02904.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SAg-RPN19
[NCBI] 		3452860 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Agona
[NCBI] 		58095 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL02904.1 [NCBI]
Genbank nucleotide accession
PV890570.1 [NCBI]
CDS location
range 37619 -> 37927
strand -
CDS
ATGAAATTAACTAAAGATCAGAAAATCCAAGTTCGTGAAACATTAAAAGCAATCCTGTCTAATGGTGAATCTCAGGTAGTATTCGAGAAAGCTGATGGCACTATTCGTTCCATGCGTTGTACTCGTGATAGTGATTCAATTCCGAGTGATCTGGTAGAAAGCACTGTTAAACCAGCTCGTGCCGAATCTATTGATATGCTGCCAGTGTATGACACTGAAAAAGAACAGTGGCGCGGATTTAGCTTTGAAAAACTGATCTCTGTGAATGGTGTTAAAGTTGAGCATTTGATTCAACTGATCACTCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4dc5d0bb0b6dc0b40bb6a114fa77b83622a6d31cd1ebdb49192c71e15577086a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Genome analysis of Salmonella phage vB_SAg-RPN19 Imklin,N., Jaipakdee,S. and Nasanit,R. 2022-01-10 — GenBank