Protein

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UniProt accession
A0AAU7J8M2 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALTQLVQARHPVLGLDYVDVRDYGAKGDGVNDDCLAIQTAIRDAHAKGITRVFVPGTDQYYRCTYPVFLLSGIELFGVGPGSRIVFENPVFSKGRGAIVIGSSYEINRTLVFAAYDSGIWAGKSTVNTSYVNPAQKQYIRDNPSFIECKNASVHDLRLDAIYLSPYTDGGYGINFVNSQDCVAYNITGSGWTQLIGMGSDTPPETPSNHRCKAWNLEVVQPNQSKTYYSIGFISNSTNCVIHDAVQHQPMADGTPNGSAGAFNLCEDCEMYNITVHELGRTQSSEGVLMNNLVGCRVEGITIKGTPTSKVISAVSHYYTDASFNVASRPNVFKNITAVNCEHAVSLRGKYVIVDAVSPYNCDYDLYFGNNNATNNQVMFEPKSVRFGGSNTHAWFLQNNTVKGWQRRYHYLRPAAMLLNGKGDTQSWNNNKLISTKRDVSLYFQHALGEEFKAIDDMRCYLRFNIAADAAYLKGSTVQMSLRQMLAFDGNIGEVPYTALTNTRVAASGMENTNLVATAAGTTGLVRMDDATNGLAYSWTLDVSMTNNTDFNYMKELRVAGYK
Physico‐chemical
properties
protein length:563 AA
molecular weight: 62009,97210 Da
isoelectric point:6,46176
aromaticity:0,10480
hydropathy:-0,25204

Domains

Domains [InterPro]
IPR011050
STR
17–404
IPR011050 DC_0117
IPR012334
STR
19–455
IPR012334
IPR024535
ENZ
19–94
IPR024535
A0AAU7J8M2
1 563
Architecture
STR
RBD
STR 17-455 | RBD 456-563
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0AAU7J8M2
1 563
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,8550
Central domain 32 409 379 0,9864
C-terminal 410 563 153 0,9377
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-409
C-terminal
410-563

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage BUCT640
[NCBI] 		3153538 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
1cbd76c94283429ecf41815138e037c889e9954ff0999af986889b8ecc57fc21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6768
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50