Protein

View in Explore
Genbank accession
YP_010669259.1 [GenBank]
Protein name
tail fiber protein; Ig-domain containing
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MALNFPSDTSNPYVDPSSGLKYIYNASIGAWEAAIQPPAIVSPTQPDITIEGFFWWDSINNLLYVYETGQWVAAGGGAGGGSTTVTVGSVAPGSPTGGDLWWDDVSGRLYIYYTDVDSSQWMDASPNLAGSNGGGVVAGDSAPANSVEGDLWYNTLNDTLNIYHNNVWETTQNTVAGVASVAGTTPITIGGTASDPVVGVSNASNSTVGVIRIATQAEVDAGASTVAAVTPGTLTNGIDNYLPAATDSQAGVVELATSAEIIAGTDNTKAMTPLAYAASVSSLGIGNPAGTVITFAGASAPTGYLACNGQQVDRVTYADLFTAIGTVYGVGDGTTTFNLPDLRGEFIRGYDDGRGIDSGRAFGSTQNSANLAHSHGVTDPGHQHNANLTDDTRNVADGGVTGGNVPTTAVVDNAVTGITIDSDGGSEARPRNIALLYCIKF
Physico‐chemical
properties
protein length:441 AA
molecular weight: 45012,56510 Da
isoelectric point:4,05003
aromaticity:0,07937
hydropathy:-0,04331

Domains

Domains [InterPro]
DC_0835
STR
1–136
DC_0835 IPR037053
DC_1413
STR
123–441
DC_1413
SSF88874
STR
287–440
SSF88874
IPR011083
ATT
290–347
IPR011083
YP_010669259.1
1 441
Architecture
STR
ATT
STR
STR 1-278 | ATT 279-347 | STR 348-441
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-N03
[NCBI] 		2718943 Uroviricota > Caudoviricetes > Pantevenvirales > Huanghaivirus > Huanghaivirus snothree
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669259.1 [NCBI]
Genbank nucleotide accession
NC_070959.1 [NCBI]
CDS location
range 151376 -> 152701
strand -
CDS
ATGGCACTCAACTTTCCTTCAGACACTTCTAACCCTTATGTCGATCCGTCGTCGGGTCTGAAGTACATTTACAACGCCTCTATTGGCGCGTGGGAAGCTGCCATTCAGCCTCCTGCTATTGTCTCCCCAACCCAGCCCGACATTACAATTGAGGGTTTCTTCTGGTGGGACTCCATCAACAACCTCCTTTACGTCTATGAGACCGGTCAGTGGGTCGCAGCGGGCGGTGGTGCTGGTGGTGGCTCTACTACTGTAACCGTCGGATCCGTGGCCCCTGGAAGCCCCACAGGGGGCGATCTGTGGTGGGACGACGTTTCTGGTCGTCTTTACATTTATTACACAGACGTCGATTCTTCTCAGTGGATGGACGCTTCACCAAACCTCGCCGGCTCTAACGGCGGTGGTGTGGTTGCTGGTGACAGTGCTCCTGCCAACTCCGTTGAGGGTGACCTCTGGTACAACACCCTAAACGACACCCTGAACATTTACCACAACAACGTTTGGGAGACCACACAGAACACAGTTGCTGGTGTTGCCTCTGTTGCGGGCACCACTCCCATCACTATCGGCGGAACGGCCTCAGACCCCGTTGTGGGCGTCTCTAACGCCTCTAACAGCACCGTTGGCGTTATTCGTATTGCCACCCAAGCGGAAGTGGATGCAGGCGCCTCTACAGTGGCTGCTGTGACTCCTGGCACACTGACGAACGGCATCGACAACTACCTCCCCGCCGCAACCGACTCGCAGGCTGGTGTTGTGGAGCTGGCGACTTCTGCTGAGATTATTGCCGGAACGGACAACACCAAAGCAATGACGCCCCTGGCTTATGCTGCCTCTGTCAGTAGCTTGGGAATCGGTAACCCAGCTGGAACGGTTATTACTTTTGCTGGCGCCAGTGCCCCCACTGGCTACCTTGCCTGTAATGGACAGCAGGTGGACCGTGTGACTTATGCCGACCTCTTTACGGCCATCGGAACCGTTTATGGTGTGGGCGACGGAACCACAACCTTCAACCTCCCCGACCTCCGTGGTGAGTTTATCCGTGGTTATGACGACGGGCGTGGAATTGACTCCGGTCGTGCTTTTGGTTCCACTCAGAACTCCGCCAACTTGGCTCACAGCCACGGTGTTACTGACCCAGGTCACCAACACAACGCAAACCTTACGGACGACACCCGTAACGTGGCTGACGGTGGTGTGACTGGTGGTAACGTCCCAACTACTGCTGTTGTAGATAACGCAGTGACCGGAATTACCATTGACAGCGACGGTGGAAGTGAGGCAAGACCTCGTAACATCGCTCTGCTCTATTGCATCAAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
688c706df810d9c4f4d520b55776e757c0ba9d4f132b44b611b3d07cc892735d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7993
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-N03 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank