Protein

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Genbank accession
AFV80701.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MKRFWRHNESYYGETEHYLYSNLQLDAGQKWKGETYAYDREHGRTGTLLESGGQRTLEEMIEFIRIRDVSFEVKGLNPNDNNLYLLFDGVRCAITPATGYRKGSEDGTIMTDAKGTAKGKFTIPAGIRCGNREVTLKNANSTSATTYTAQGRKKTAQDIIIRTRVTVNLVDPLAQSFQYDENRTISSLGLYFASKGDKQSNVVIQIRGMGDQGYPNKTIYAETVMNADDIKVSNNASAETRVYFDDPMMAEGGKEYAIVIITENSDYTMWVGTRTKPKIDKPNEVISGNPYLQGVLFSSSNASTWTPHQNSDLKFGIYTSKFNETATIEFEPIKDVSADRIVLMSTYLTPERTGCTWEMKLILDDMASSTTFDQLKWEPIGNYQDLDVLGLARQVKLRATFESNRYISPLMSSSDLTFTTFLTELTGSYVGRAIDMTEAPYNTVRFSYEAFLPKGTKVVPKYSADDGKTWKTFTKSPTTTRANNEFTRYVIDEKVKSSGTNTKLQVRLDLSTENSFLRPRVRRLMVTTRDE
Physico‐chemical
properties
protein length:531 AA
molecular weight: 60014,76060 Da
isoelectric point:7,58246
aromaticity:0,10169
hydropathy:-0,56497

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFV80701.1
1 531
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,8956
Central domain 171 389 220 0,0965
C-terminal 390 531 141 0,1905
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-389
C-terminal
390-531

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SA5
[NCBI] 		1239385 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV80701.1 [NCBI]
Genbank nucleotide accession
JX875065 [NCBI]
CDS location
range 127942 -> 129537
strand -
CDS
ATGAAACGATTTTGGAGACATAATGAAAGTTACTATGGTGAGACTGAGCATTACTTGTATTCTAACTTACAGTTAGATGCAGGACAAAAGTGGAAAGGTGAAACTTACGCTTATGATAGAGAGCATGGTCGTACCGGTACTTTATTGGAATCAGGAGGACAACGTACTCTAGAAGAAATGATTGAATTCATTAGAATCAGAGATGTATCCTTCGAAGTTAAAGGACTAAACCCTAATGATAATAATTTATATTTATTATTTGATGGAGTAAGATGTGCTATAACACCTGCAACTGGCTATAGAAAAGGCTCTGAAGATGGTACGATAATGACAGATGCTAAAGGAACAGCTAAAGGTAAGTTTACTATTCCTGCAGGTATTCGTTGTGGTAACCGAGAAGTTACACTTAAGAATGCTAACTCTACAAGTGCTACAACTTACACAGCCCAAGGACGTAAAAAAACCGCTCAAGATATTATTATCAGAACTCGTGTAACAGTAAACTTAGTAGACCCGTTAGCACAATCATTCCAATATGATGAGAATAGAACTATATCATCATTAGGATTATACTTTGCTTCTAAAGGTGATAAACAATCTAATGTTGTTATCCAAATTAGAGGTATGGGTGACCAAGGTTATCCTAATAAAACAATCTATGCAGAAACAGTTATGAATGCTGATGATATTAAAGTATCTAATAATGCTAGTGCTGAAACTAGAGTATACTTTGATGACCCTATGATGGCTGAAGGCGGTAAGGAGTACGCTATTGTTATTATTACTGAGAACAGTGATTATACAATGTGGGTAGGTACTAGAACTAAGCCTAAAATTGATAAACCTAATGAGGTTATTTCAGGTAATCCATACCTACAAGGTGTATTATTCAGTTCATCAAACGCATCAACATGGACTCCTCACCAAAACTCTGACCTTAAATTTGGTATTTATACTTCTAAATTTAATGAGACAGCAACGATTGAATTCGAACCAATTAAAGATGTATCAGCGGATAGAATAGTTCTTATGTCTACGTACTTAACTCCTGAGAGAACAGGATGTACGTGGGAAATGAAATTAATTCTAGATGATATGGCATCTTCTACAACATTCGACCAATTGAAATGGGAGCCTATCGGTAACTATCAAGACTTAGATGTTTTAGGTCTAGCAAGACAAGTTAAGTTAAGAGCAACTTTCGAATCTAATAGATATATCTCACCATTAATGAGCTCTAGTGATTTAACATTCACTACATTCTTAACAGAGTTAACAGGTTCATATGTTGGTAGAGCTATTGATATGACAGAGGCTCCTTACAATACAGTAAGATTTAGTTATGAAGCTTTCTTACCTAAAGGTACTAAAGTTGTTCCTAAGTATTCTGCGGATGATGGAAAAACTTGGAAAACATTTACTAAATCCCCTACAACTACTAGAGCCAATAATGAGTTTACACGCTATGTCATTGACGAGAAAGTAAAATCATCAGGAACAAATACTAAACTACAAGTTAGATTAGATTTATCAACTGAAAATAGCTTTTTACGTCCTCGTGTTCGTAGACTTATGGTTACTACTAGGGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c69577618e4da7d652e0d0ccfe1f5b16834b089570f1c0d1259df5ea63e2ecbf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50