Protein

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Genbank accession
YP_007675704.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MARDKAKLQNINLSDLVNYPNGRIADNTGAGDGTPVSEVTYGDIHETYAKLMRLSGLKYNDLPDNEENGYQLVEAIRSLPSKNDLILNLAISSNVYTVPLRMDSLIEGESFILKATVAKSSSTSIRGTLDNKTKSVSVVGDFKVNEYVRMLVTSNSILITRLIDAVNLNSAVNDLLYLKAATSAQDLAGTLINVALTPKSSADTYANKTIGATSGNFLATTARNGHLSKEDKLRIDNLASPEDLIKVDSGTKDVENFKSGRDSANPNNNFSFNYADVFPPSGKTIANLKGFIASISEINFVGEVDSNDTLYCKWRIETNKVRIICSNSESRSAAKVQYMAIWI
Physico‐chemical
properties
protein length:343 AA
molecular weight: 37340,60710 Da
isoelectric point:5,85950
aromaticity:0,06706
hydropathy:-0,24665

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phiSM
[NCBI] 		756280 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota
Host Cellulophaga sp. MM#3
[NCBI] 		192170 Bacteria > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Cellulophaga

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007675704.1 [NCBI]
Genbank nucleotide accession
NC_020860 [NCBI]
CDS location
range 24184 -> 25215
strand +
CDS
ATGGCTAGAGATAAAGCAAAATTGCAGAACATAAATTTAAGTGACTTAGTAAATTACCCGAACGGCAGAATAGCTGATAATACTGGAGCTGGCGACGGTACACCTGTAAGCGAAGTTACCTACGGTGATATTCACGAAACTTATGCTAAGTTAATGAGGTTATCAGGTTTAAAATACAACGACTTACCAGATAATGAGGAAAACGGCTACCAACTAGTTGAAGCGATTAGATCTTTGCCTAGCAAGAATGATTTGATTTTAAATCTAGCTATTTCTTCAAATGTTTACACCGTGCCGCTAAGAATGGATAGTTTAATTGAGGGTGAAAGTTTTATATTGAAAGCTACTGTAGCTAAATCATCAAGTACCAGTATAAGAGGAACTTTAGACAATAAAACTAAGTCAGTAAGCGTAGTAGGTGATTTTAAAGTTAACGAATACGTTAGAATGCTAGTTACATCTAATTCTATACTAATTACAAGGCTGATAGATGCGGTTAATTTGAATTCAGCGGTTAATGACTTGCTTTACTTAAAAGCAGCTACTTCAGCGCAAGATTTAGCAGGCACCTTGATTAATGTAGCACTCACGCCTAAGTCTTCCGCAGACACTTATGCAAACAAAACGATAGGCGCTACTAGCGGAAATTTTTTAGCTACTACAGCGAGAAACGGTCACTTAAGTAAAGAGGATAAACTTAGAATAGACAATTTAGCAAGTCCTGAAGATTTAATAAAAGTAGACAGCGGAACAAAGGATGTTGAAAACTTTAAATCAGGTAGAGATTCTGCAAATCCTAATAACAACTTCTCTTTTAATTATGCAGATGTTTTTCCTCCATCAGGCAAGACAATAGCTAATTTAAAAGGATTTATAGCTTCTATTTCTGAAATTAATTTTGTAGGTGAAGTTGATAGCAATGATACTTTATATTGCAAATGGAGAATCGAAACTAATAAAGTAAGAATTATTTGTAGCAACTCAGAAAGTCGCTCAGCTGCAAAGGTTCAGTATATGGCGATTTGGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a988999e463eb5f094c95094342df0c48c46d911061b1958c8f467eeed19381a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6956
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cellulophaga phage phiSM Henn,M.R., Reimann,L., Holmfelt,K., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank