Protein

View in Explore
Genbank accession
ABY71009.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MARFKNPETIHVADGVEAVFSLDFPFLRREDVFVQVDKILTTDYTWVDNTNIQLAVVPKKDQEVRIFRDTPAQVPDTQFSQGIPFLPRYIDANNKQLLYAVQEGINTANLALDGVLDAIRIAEEARRLAQEALDAANEALRRALGFAEIRTVTEDSDIDPSWRGYWNRCITSEQSLTLTMQMEDPDEPWIEFSEVHFEQAGIRDLNIVAGPGVTINRLQNTTMQLYGENGVCTLKRLGPNHWIIFGAMEDD
Physico‐chemical
properties
protein length:251 AA
molecular weight: 28486,71230 Da
isoelectric point:4,54242
aromaticity:0,08765
hydropathy:-0,30398

Domains

Domains [InterPro]
IPR005604
ATT
12–117
IPR005604 Coil
DC_0220
STR
12–251
DC_0220
ABY71009.1
1 251
Architecture
ATT
STR
ATT 12-117 | STR 118-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PT2
[NCBI] 		496396 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABY71009.1 [NCBI]
Genbank nucleotide accession
EU236438 [NCBI]
CDS location
range 35944 -> 36699
strand +
CDS
GTGGCTCGGTTCAAGAATCCCGAGACCATCCACGTTGCAGATGGGGTCGAGGCTGTCTTCAGTCTCGACTTCCCATTCCTGCGGCGTGAGGACGTATTCGTCCAGGTCGATAAGATACTCACCACCGACTACACGTGGGTGGACAACACCAACATCCAATTGGCCGTGGTGCCGAAGAAGGACCAAGAGGTCCGCATCTTCCGCGACACGCCTGCCCAGGTCCCGGACACGCAGTTCAGCCAGGGCATCCCGTTCCTGCCTCGATACATCGACGCGAACAACAAGCAGCTCCTGTACGCTGTGCAGGAAGGCATCAACACCGCGAACCTCGCTCTCGACGGCGTACTCGACGCGATCCGCATCGCCGAGGAAGCTCGTCGCCTGGCACAGGAAGCACTCGACGCCGCCAATGAGGCGCTGCGCCGTGCCCTGGGCTTCGCCGAGATTCGCACCGTGACCGAGGACTCGGACATCGATCCGAGCTGGCGTGGTTACTGGAACCGCTGCATCACCTCCGAGCAGTCCCTGACCCTGACCATGCAGATGGAGGACCCGGACGAGCCTTGGATCGAGTTCAGCGAGGTCCACTTCGAACAGGCGGGCATTCGCGACCTCAACATCGTGGCCGGCCCTGGCGTGACCATCAACCGCTTGCAGAACACCACCATGCAGCTCTATGGCGAGAACGGTGTGTGTACCCTGAAGCGCCTCGGCCCTAACCACTGGATCATCTTCGGGGCGATGGAGGACGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5770093a04b3e2f2b3482e2985a3a3968fcb6d18560c7da6a6431ac89293046b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9223
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomes and proteomes of two new phiKMV-like Pseudomonas bacteriophages Glonti,T., Lingohr,E.J., Kropinski,A.M. and Chanishvili,N. 2021-09-24 — GenBank