Protein

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Genbank accession
YP_004539115.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSTVQGNYPTLLGGVSQQVYTERQVGQVETQVNMTSDTVRGLRKRPGTRLVLDVSGEDTQWSLGNTGHLRQFTADLGWGQTSFVVNTITGTVSAIQEADVMQVLGTKPYLVTSNPSDIVFATVGSELYVGNCDVLPATVTNESRWNPRLGGYFFVLSGAYGKVYSVTVSWGTVSYTASYTTPQASDTDASNQSTGEYIINQLVNSLSSQVSSSVLNLASDGSYLSFRLQSGYDSDDVLLVTTSTGSTYAIASKAHSAKSTDDLPARVPFNDGFIMTVGDTGSYQYFQWLVGESRWQECGKYGSPTGLDPGTMPLKIIASDTENQHEFSAVEWGGREAGDDDNNETPQFLLEDGVGMTGMSAFQGRLIIFSGPYISMSSNVRAYRTYFYRTTVTQVLDGDRIEFTSTSFSGASFRYGVPFNSDLILASETHQGVIPGRNQVLTPNNATAVLTSAYQMNTDVSPLVCGRSLYYSYPRSTSSFAIKELTPSGYTDLQYVSQDVTDHIPTYLEGAASYICSSTTNNIVVIGSTTELNTLYVNEYMWSADSKVQSSWHKWTFNGTIHCAWFVRENLLLLIEQDNAMHLVYLSMRDVPNPEDANRYLPATDFNLTLDVTNPTGNAPYIQFASTGVQAQLWDLMTASGLDAFAAVTTTGPYIGAEVGLKSLEPATRRLHLYATYGERTLHVGQRFTAQFSPTPPIITDSNGGYVDVPKLMIQAFNLIVRYTSPFKITAGDDAGLVYDGLDSSAIDFQSEELNLNQATLTKRHKIRARMGTNSETSETLFESNTPGDFNLLTLGYILKFNNRIRRM
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88563,47100 Da
isoelectric point:4,80616
aromaticity:0,10520
hydropathy:-0,22698

Domains

Domains [InterPro]
IPR058003
TTP
1–808
IPR058003
DC_0058
STR
1–808
DC_0058
YP_004539115.1
1 808
Architecture
STR
STR 1-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004539115.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9859
Central domain 144 342 200 0,1164
C-terminal 343 808 465 0,2728
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-342
C-terminal
343-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage LIMEzero
[NCBI] 		943335 Uroviricota > Caudoviricetes > Autographivirales > Stentvirinae > Waewaevirus
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004539115.1 [NCBI]
Genbank nucleotide accession
NC_015585 [NCBI]
CDS location
range 25806 -> 28232
strand +
CDS
ATGTCTACAGTTCAAGGTAATTACCCCACGCTCCTGGGCGGCGTCAGTCAGCAGGTTTACACCGAGCGCCAGGTGGGGCAGGTTGAAACCCAGGTCAATATGACCAGCGATACCGTACGCGGGTTACGCAAGCGGCCAGGTACGCGCCTGGTCCTGGACGTGTCCGGCGAAGATACCCAATGGAGCCTGGGTAATACCGGGCACTTGAGACAATTCACAGCAGACCTGGGCTGGGGGCAGACATCGTTCGTCGTGAACACAATCACCGGCACTGTATCAGCGATTCAGGAAGCCGATGTGATGCAGGTGCTCGGCACTAAGCCATACCTGGTGACCAGCAATCCATCTGACATCGTGTTCGCCACAGTAGGTTCCGAACTGTACGTTGGCAACTGCGACGTGCTCCCGGCCACTGTGACCAATGAGAGCCGCTGGAACCCCCGCCTGGGCGGCTACTTTTTCGTGCTGTCAGGTGCGTACGGTAAGGTGTACTCCGTGACTGTATCCTGGGGCACTGTGTCGTACACTGCGTCGTACACGACGCCGCAGGCCAGCGACACTGACGCATCAAACCAGTCTACCGGTGAGTACATCATCAACCAGCTCGTGAACTCCCTCAGCAGCCAGGTGAGTTCATCTGTGCTGAACCTGGCGTCAGACGGAAGCTACCTGTCGTTCAGGCTGCAGTCCGGGTACGACTCTGACGACGTGCTGCTCGTGACGACATCGACCGGTTCAACGTACGCCATAGCATCAAAGGCCCACTCAGCAAAGAGCACTGACGACCTACCTGCCCGCGTACCATTCAATGACGGCTTTATCATGACCGTTGGTGACACTGGCTCATACCAGTATTTCCAGTGGTTGGTGGGTGAGAGCCGGTGGCAGGAGTGCGGCAAGTACGGCTCACCTACGGGCCTGGACCCGGGCACGATGCCGCTGAAAATTATCGCATCAGACACTGAGAACCAGCACGAGTTCTCCGCTGTCGAGTGGGGTGGTCGAGAAGCTGGGGATGACGATAATAACGAGACGCCACAGTTCCTGCTGGAAGACGGCGTGGGGATGACTGGCATGTCCGCGTTTCAGGGGCGGCTGATTATCTTCTCTGGCCCGTACATCAGCATGTCGAGCAACGTCAGGGCGTACCGCACGTACTTCTATCGCACCACAGTTACGCAGGTGCTGGACGGCGACCGCATTGAGTTCACATCGACCAGCTTCTCAGGTGCTAGCTTCCGGTACGGGGTGCCGTTTAACTCTGACCTGATTCTGGCGAGTGAGACGCACCAGGGCGTTATTCCGGGGCGTAACCAGGTGTTAACGCCAAACAATGCCACAGCCGTGCTGACCAGCGCGTACCAGATGAACACCGACGTGTCGCCACTGGTGTGTGGCCGCAGCCTGTACTACTCGTACCCGCGCTCGACCAGCTCGTTTGCCATTAAGGAACTGACGCCATCTGGTTACACCGATTTGCAATACGTGAGCCAGGACGTGACAGACCACATCCCAACGTATCTGGAGGGCGCGGCCTCGTACATCTGCAGCTCGACCACGAACAACATCGTAGTCATCGGCTCAACGACTGAGCTGAACACGCTGTACGTCAACGAGTACATGTGGTCAGCTGACAGCAAGGTGCAATCATCATGGCATAAGTGGACCTTCAACGGGACCATTCACTGTGCCTGGTTCGTACGCGAGAACCTACTGCTGTTGATTGAGCAGGACAACGCGATGCACCTGGTGTACCTGTCAATGCGCGACGTGCCTAACCCCGAGGATGCGAACCGGTATCTACCGGCGACTGACTTCAACCTGACGCTGGACGTAACAAACCCTACCGGTAATGCGCCGTACATTCAGTTCGCGAGTACTGGTGTGCAGGCCCAGCTGTGGGATTTGATGACCGCCAGCGGCCTGGATGCATTCGCCGCCGTCACCACAACCGGGCCGTACATCGGCGCAGAGGTGGGCTTGAAATCGCTGGAGCCAGCAACACGGAGGCTGCACCTGTACGCCACGTACGGCGAACGCACCCTGCATGTGGGTCAGCGCTTCACTGCGCAGTTCTCGCCAACGCCGCCGATTATCACGGACAGCAATGGCGGCTATGTCGATGTGCCGAAGTTGATGATTCAGGCGTTTAATCTGATTGTGCGGTACACATCACCGTTCAAGATTACAGCCGGGGATGACGCTGGGCTGGTGTATGATGGCCTGGATTCATCTGCCATCGACTTCCAGTCAGAGGAGCTGAACCTCAACCAGGCTACGCTGACGAAGCGCCACAAGATTCGTGCGCGTATGGGTACTAACTCGGAGACGAGTGAGACCCTGTTCGAGTCCAATACTCCGGGTGACTTTAACCTATTGACCCTGGGGTATATCCTCAAGTTCAACAACCGTATTCGGAGAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4353750cc7948ff30ec5facb2d3f597aa8e731b4c842b868ec8451d48e56fa75
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50